RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 GBP6Q6ZN66 633 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 CREBRFQ8IUR6 639 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 PNPLA1Q8N8W4 532 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 MDM1Q8TC05 714 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 STK32AQ8WU08 396 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 ZNF606Q8WXB4 792 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 GOLGA1Q92805 767 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 MIS12Q9H081 205 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 THAP10Q9P2Z0 257 aaPredicted RBP13.74□□□□□ -0.21
H3F3B-213ENST00000593254 APEX2Q9UBZ4 518 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 RAD54BQ9Y620 910 aa13.74□□□□□ -0.21
H3F3B-213ENST00000593254 SHROOM3Q8TF72 1996 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 BECN2A8MW95 431 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 SART1O43290 800 aaKnown RBP13.73□□□□□ -0.21
H3F3B-213ENST00000593254 MED7O43513 233 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 LETM1O95202 739 aaPredicted RBP13.73□□□□□ -0.21
H3F3B-213ENST00000593254 ZIC2O95409 532 aaPredicted RBP13.73□□□□□ -0.21
H3F3B-213ENST00000593254 SYPP08247 313 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 GNA15P30679 374 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 ACADSBP45954 432 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 APBA1Q02410 837 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 DPCR1Q3MIW9 517 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 NUGGCQ68CJ6 796 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 SMYD5Q6GMV2 418 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 DENND1BQ6P3S1 775 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 CLEC17AQ6ZS10 378 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 SLC41A1Q8IVJ1 513 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 UNC45BQ8IWX7 931 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 SCUBE3Q8IX30 993 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 DEFB119Q8N690 84 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 UCMAQ8WVF2 138 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 HNRNPLLQ8WVV9 542 aaKnown RBP13.73□□□□□ -0.21
H3F3B-213ENST00000593254 SHC3Q92529 594 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 MS4A3Q96HJ5 214 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 MRGPRX1Q96LB2 322 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 SLC4A5Q9BY07 1137 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 IRX2Q9BZI1 471 aaPredicted RBP13.73□□□□□ -0.21
H3F3B-213ENST00000593254 THAP9Q9H5L6 903 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 ACP6Q9NPH0 428 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 ST7Q9NRC1 585 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 ELOVL2Q9NXB9 296 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 DKK4Q9UBT3 224 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 CYTH4Q9UIA0 394 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 RAXQ9Y2V3 346 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 STON1Q9Y6Q2 735 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 ZNF462Q96JM2 2506 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 NUMA1Q14980 2115 aa13.73□□□□□ -0.21
H3F3B-213ENST00000593254 IGHV1OR15-9A0A0B4J2B8 117 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 ZBTB24O43167 697 aaPredicted RBP13.72□□□□□ -0.21
H3F3B-213ENST00000593254 THAP12O43422 761 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 TSPAN3O60637 253 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 CBFA2T3O75081 653 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 ZNF217O75362 1048 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 NCAM1P13591 858 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 PON1P27169 355 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 HLA-FP30511 346 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 ANP32AP39687 249 aaKnown RBP13.72□□□□□ -0.21
H3F3B-213ENST00000593254 IL12RB1P42701 662 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 MTIF2P46199 727 aaKnown RBP13.72□□□□□ -0.21
H3F3B-213ENST00000593254 NNTQ13423 1086 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 STARD3Q14849 445 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 MAN2A1Q16706 1144 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 TPD52L1Q16890 204 aaPredicted RBP13.72□□□□□ -0.21
H3F3B-213ENST00000593254 ARHGAP44Q17R89 818 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 FAM133BQ5BKY9 247 aaKnown RBP13.72□□□□□ -0.21
H3F3B-213ENST00000593254 TMEM215Q68D42 235 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 BEND5Q7L4P6 421 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 GLRX5Q86SX6 157 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 TMEM110Q86TL2 294 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 NAXDQ8IW45 347 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 ADAM32Q8TC27 787 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 DQX1Q8TE96 717 aaKnown RBP13.72□□□□□ -0.21
H3F3B-213ENST00000593254 AZIN2Q96A70 460 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 FAM149B1Q96BN6 582 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 ERLEC1Q96DZ1 483 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 TMA16Q96EY4 203 aaKnown RBP13.72□□□□□ -0.21
H3F3B-213ENST00000593254 SERPINB11Q96P15 392 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 NUP62CLQ9H1M0 184 aa13.72□□□□□ -0.21
H3F3B-213ENST00000593254 ATMQ13315 3056 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 E5RJQ4 531 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 IRAK2O43187 625 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 PAPSS1O43252 624 aaPredicted RBP13.71□□□□□ -0.21
H3F3B-213ENST00000593254 TIMM44O43615 452 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 ACSL4O60488 711 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 ERCC5P28715 1186 aaPredicted RBP13.71□□□□□ -0.21
H3F3B-213ENST00000593254 SLC11A2P49281 568 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 SGSHP51688 502 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 TBX4P57082 545 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 PDCLQ13371 301 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 ZNF234Q14588 700 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 E2F5Q15329 346 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 FUT11Q495W5 492 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 MPP7Q5T2T1 576 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 PIK3R6Q5UE93 754 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 RFWD3Q6PCD5 774 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 KIAA0907Q7Z7F0 614 aaPredicted RBP13.71□□□□□ -0.21
H3F3B-213ENST00000593254 SLCO6A1Q86UG4 719 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 FAM114A1Q8IWE2 563 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.71□□□□□ -0.213e-17■■□□□ 13.1
H3F3B-213ENST00000593254 WFIKKN2Q8TEU8 576 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms