RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 SIN3BO75182 1162 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 DNTTP04053 509 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 CMA1P23946 247 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 CD27P26842 260 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 SYKP43405 635 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 GRIA4P48058 902 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 METAP1P53582 386 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 PMS1P54277 932 aaKnown RBP11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 BCAT1P54687 386 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 DAOAP59103 153 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 RPS24P62847 133 aaKnown RBP11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 TEAD4Q15561 434 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 NFIL3Q16649 462 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 FSCBQ5H9T9 825 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 ADGRF1Q5T601 910 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 PIK3R6Q5UE93 754 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 TCERG1LQ5VWI1 586 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 ZNF776Q68DI1 518 aaPredicted RBP11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 KIAA0895LQ68EN5 471 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 NCEH1Q6PIU2 408 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 KIAA0907Q7Z7F0 614 aaPredicted RBP11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 AHI1Q8N157 1196 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 CFAP52Q8N1V2 620 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 FBXL13Q8NEE6 735 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 ADAM32Q8TC27 787 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 KAT5Q92993 513 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 IGSF8Q969P0 613 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 LMLNQ96KR4 655 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 CDC6Q99741 560 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 NEUROG2Q9H2A3 272 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 XPO7Q9UIA9 1087 aaKnown RBP11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 CFAP45Q9UL16 551 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 ZDHHC9Q9Y397 364 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 SHROOM3Q8TF72 1996 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 ASXL3Q9C0F0 2248 aa11.66□□□□□ -0.54
PRKCSH-220ENST00000593104 DSPP15924 2871 aaKnown RBP11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 TRIM49BA6NDI0 452 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 TTC34A8MYJ7 566 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 RNF225M0QZC1 329 aaPredicted RBP11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 O00370 1275 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 TIMM44O43615 452 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 HSP90AA1P07900 732 aaKnown RBP11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 DLDP09622 509 aaKnown RBP11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 CSKP41240 450 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 GRK6P43250 576 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 GALCP54803 685 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 BST2Q10589 180 aaKnown RBP11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 CUL2Q13617 745 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 KCNJ12Q14500 433 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 SUZ12Q15022 739 aaKnown RBP11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 SMAD1Q15797 465 aaKnown RBP11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 SGO2Q562F6 1265 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 PMF1Q6P1K2 205 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 KRBA2Q6ZNG9 492 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 MMAAQ8IVH4 418 aaKnown RBP11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 MFN1Q8IWA4 741 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 SIX6OS1Q8N1H7 587 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 GUF1Q8N442 669 aaKnown RBP11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 CARNMT1Q8N4J0 409 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 UBR7Q8N806 425 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 WFIKKN2Q8TEU8 576 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 SNX21Q969T3 373 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 MRGPRX3Q96LB0 322 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 SPATA32Q96LK8 384 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 UBXN6Q9BZV1 441 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 NUCKS1Q9H1E3 243 aaKnown RBP11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 PABPC3Q9H361 631 aaKnown RBP11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 GDPD2Q9HCC8 539 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 FBXL12Q9NXK8 326 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 FTSJ1Q9UET6 329 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 STOML2Q9UJZ1 356 aa11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 HBS1LQ9Y450 684 aaKnown RBP11.65□□□□□ -0.54
PRKCSH-220ENST00000593104 A0A1B0GTQ1 180 aa11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 TLX3O43711 291 aaPredicted RBP11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 RNASEH2AO75792 299 aaKnown RBP11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 MOCS2O96007 188 aaPredicted RBP11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 IGLV3-27P01718 113 aa11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 CENPBP07199 599 aaPredicted RBP11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 EPB41P11171 864 aaKnown RBP11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 VAV1P15498 845 aa11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 POLR2EP19388 210 aaKnown RBP11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 BRD2P25440 801 aaKnown RBP11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 RPL13P26373 211 aaKnown RBP11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 PSMD8P48556 350 aa11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 STK19P49842 368 aaPredicted RBP11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 C21orf59P57076 290 aa11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 PPP2CBP62714 309 aa11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 PPP2CAP67775 309 aa11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 BNIP3Q12983 259 aa11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 PNOCQ13519 176 aa11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 TTC31Q49AM3 519 aaPredicted RBP11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 PKDCCQ504Y2 493 aa11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 HSCBQ8IWL3 235 aa11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 APCDD1Q8J025 514 aa11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 AADATQ8N5Z0 425 aa11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 EID2Q8N6I1 236 aa11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 CNDP2Q96KP4 475 aaKnown RBP11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 RPL10LQ96L21 214 aaKnown RBP11.64□□□□□ -0.55
PRKCSH-220ENST00000593104 MIS12Q9H081 205 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms