RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 PCED1AQ9H1Q7 454 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 KCTD10Q9H3F6 313 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 ITM2CQ9NQX7 267 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 ANO10Q9NW15 660 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 CACNA2D2Q9NY47 1150 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 FBXO10Q9UK96 956 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 TRAF3IP3Q9Y228 551 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 STON1Q9Y6Q2 735 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 TRIM24O15164 1050 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 STC2O76061 302 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 TOP3BO95985 862 aaKnown RBP9.87□□□□□ -0.83
BRCA1-226ENST00000591534 PENKP01210 267 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-226ENST00000591534 NCAM1P13591 858 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 CD59P13987 128 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 CD58P19256 250 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 NR2F2P24468 414 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 MAPK1P28482 360 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 GTF2H1P32780 548 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 PSMC2P35998 433 aaKnown RBP9.87□□□□□ -0.83
BRCA1-226ENST00000591534 DLG4P78352 724 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 POU4F2Q12837 409 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 ORC1Q13415 861 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 SUZ12Q15022 739 aaKnown RBP9.87□□□□□ -0.83
BRCA1-226ENST00000591534 NFIL3Q16649 462 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 TOGARAM2Q6ZUX3 1019 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 ANKS1BQ7Z6G8 1248 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 TMPRSS6Q8IU80 811 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 SLC41A1Q8IVJ1 513 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 NAXDQ8IW45 347 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 FMR1NBQ8N0W7 255 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-226ENST00000591534 RHBDD1Q8TEB9 315 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 DDI1Q8WTU0 396 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 DNASE2BQ8WZ79 361 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 BHMTQ93088 406 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 ELMO3Q96BJ8 720 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 SIPA1Q96FS4 1042 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 TOE1Q96GM8 510 aaKnown RBP9.87□□□□□ -0.83
BRCA1-226ENST00000591534 HEXIM2Q96MH2 286 aaKnown RBP9.87□□□□□ -0.83
BRCA1-226ENST00000591534 GSDMAQ96QA5 445 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 ACOX2Q99424 681 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 CDC6Q99741 560 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 OLA1Q9NTK5 396 aaKnown RBP9.87□□□□□ -0.83
BRCA1-226ENST00000591534 WSB2Q9NYS7 404 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-226ENST00000591534 THAP10Q9P2Z0 257 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-226ENST00000591534 RASAL2Q9UJF2 1139 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 KLK13Q9UKR3 277 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 PLA2G4CQ9UP65 541 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 RAD54BQ9Y620 910 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 HELZP42694 1942 aaKnown RBP9.87□□□□□ -0.83
BRCA1-226ENST00000591534 ANAPC1Q9H1A4 1944 aa9.87□□□□□ -0.83
BRCA1-226ENST00000591534 EML5Q05BV3 1969 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 THADAQ6YHU6 1953 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 ABCA7Q8IZY2 2146 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 PTPRDP23468 1912 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 HHLA1C9JL84 531 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 SH3BP5O60239 455 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 CILPO75339 1184 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 ZNF883P0CG24 379 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 CORO1AP31146 461 aaKnown RBP9.86□□□□□ -0.83
BRCA1-226ENST00000591534 GCLMP48507 274 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 HARS2P49590 506 aaKnown RBP9.86□□□□□ -0.83
BRCA1-226ENST00000591534 MFAP3P55082 362 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 EFEMP1Q12805 493 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 SFSWAPQ12872 951 aaKnown RBP9.86□□□□□ -0.83
BRCA1-226ENST00000591534 GRIK2Q13002 908 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 STIM1Q13586 685 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 LAPTM4AQ15012 233 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 ZSCAN23Q3MJ62 389 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 FUT11Q495W5 492 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 KRT39Q6A163 491 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 SPOPLQ6IQ16 392 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 LRSAM1Q6UWE0 723 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 KRBA2Q6ZNG9 492 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 GPRIN1Q7Z2K8 1008 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 RAB44Q7Z6P3 723 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-226ENST00000591534 FAM186BQ8IYM0 893 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 CPXM2Q8N436 756 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 CHCHD4Q8N4Q1 142 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 ZNF557Q8N988 423 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-226ENST00000591534 GPT2Q8TD30 523 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 SETD7Q8WTS6 366 aaKnown RBP9.86□□□□□ -0.83
BRCA1-226ENST00000591534 ADAMTS14Q8WXS8 1223 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 ERCC4Q92889 916 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-226ENST00000591534 WBP2Q969T9 261 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 PLD4Q96BZ4 506 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 TMEM176AQ96HP8 235 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 GPR174Q9BXC1 333 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 CIPCQ9C0C6 399 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 MIR1-1HGQ9H1L0 117 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 FBRSQ9HAH7 460 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 NMUR1Q9HB89 426 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 TMEM8AQ9HCN3 771 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 CD248Q9HCU0 757 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 FSCN3Q9NQT6 498 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 OSER1Q9NX31 292 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 ELOVL2Q9NXB9 296 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 PLK2Q9NYY3 685 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 MARCH2Q9P0N8 246 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 STIM2Q9P246 746 aa9.86□□□□□ -0.83
BRCA1-226ENST00000591534 USP36Q9P275 1121 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms