RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 IFI35P80217 286 aaPredicted RBP9.04□□□□□ -0.96
SMAD4-206ENST00000588860 PPARDQ03181 441 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 AP1B1Q10567 949 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 SEMA3BQ13214 749 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 AUHQ13825 339 aaKnown RBP9.04□□□□□ -0.96
SMAD4-206ENST00000588860 MRPL58Q14197 206 aaKnown RBP9.04□□□□□ -0.96
SMAD4-206ENST00000588860 STAT4Q14765 748 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 PAFAH1B3Q15102 231 aaKnown RBP9.04□□□□□ -0.96
SMAD4-206ENST00000588860 PDK1Q15118 436 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 PRKD1Q15139 912 aaPredicted RBP9.04□□□□□ -0.96
SMAD4-206ENST00000588860 DDR2Q16832 855 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 BBS9Q3SYG4 887 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 MSS51Q4VC12 460 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 FAM72AQ5TYM5 149 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 HEATR6Q6AI08 1181 aaKnown RBP9.04□□□□□ -0.96
SMAD4-206ENST00000588860 FAM72DQ6L9T8 149 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 MFSD5Q6N075 450 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 CNKSR3Q6P9H4 555 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 PPP1R21Q6ZMI0 780 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 LEKR1Q6ZMV7 388 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.04□□□□□ -0.965e-7■■■□□ 18.5
SMAD4-206ENST00000588860 ARHGEF18Q6ZSZ5 1173 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 PDZD4Q76G19 769 aaPredicted RBP9.04□□□□□ -0.96
SMAD4-206ENST00000588860 SCD5Q86SK9 330 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 FAM72BQ86X60 149 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 PDIK1LQ8N165 341 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 NUP93Q8N1F7 819 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 CRIPAKQ8N1N5 446 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 ARHGAP18Q8N392 663 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 TTC9BQ8N6N2 239 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 NETO2Q8NC67 525 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 BCL7CQ8WUZ0 217 aaPredicted RBP9.04□□□□□ -0.96
SMAD4-206ENST00000588860 SERPINB12Q96P63 405 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 OLFM3Q96PB7 478 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 SEPT5Q99719 369 aaPredicted RBP9.04□□□□□ -0.96
SMAD4-206ENST00000588860 GDF15Q99988 308 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 SELENOSQ9BQE4 189 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 TTPALQ9BTX7 342 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 PHACTR1Q9C0D0 580 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 SMOC2Q9H3U7 446 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 FBXO44Q9H4M3 255 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 TMEM39AQ9NV64 488 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 GMIPQ9P107 970 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 TBX21Q9UL17 535 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 EXOC1LA0A1B0GW35 172 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 MTMR11A4FU01 709 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 C5orf60A6NFR6 353 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 RNF103O00237 685 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 IRAK2O43187 625 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 MSI1O43347 362 aaKnown RBP9.03□□□□□ -0.96
SMAD4-206ENST00000588860 TCEA3O75764 348 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 SOAT2O75908 522 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 IGLV3-25P01717 112 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 CLTBP09497 229 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 ERCC2P18074 760 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 ATP5DP30049 168 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 PHBP35232 272 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 RFC2P35250 354 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 HCAR3P49019 387 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 PGFP49763 221 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 IRAK1P51617 712 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 ZNF135P52742 658 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-206ENST00000588860 GUCY1A3Q02108 690 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 IKBKEQ14164 716 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 MGAT5BQ3V5L5 792 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 CCDC38Q502W7 563 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 BRMS1LQ5PSV4 323 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 RTP2Q5QGT7 225 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 SPOUT1Q5T280 376 aaKnown RBP9.03□□□□□ -0.96
SMAD4-206ENST00000588860 EMC10Q5UCC4 262 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 C1orf53Q5VUE5 145 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 PRSS55Q6UWB4 352 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-206ENST00000588860 RNF19BQ6ZMZ0 732 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 DENND5BQ6ZUT9 1274 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 ANKS3Q6ZW76 656 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 TAS1R1Q7RTX1 841 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 TMEM173Q86WV6 379 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-206ENST00000588860 VPS52Q8N1B4 723 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 ZNF454Q8N9F8 522 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 ATP11CQ8NB49 1132 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 ATAD1Q8NBU5 361 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 CCNYQ8ND76 341 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 SPPL2BQ8TCT7 592 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 GPR152Q8TDT2 470 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 PYROXD1Q8WU10 500 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 HTR3CQ8WXA8 447 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 CASP10Q92851 521 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 WNT2BQ93097 391 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 FBXO32Q969P5 355 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 LGMNQ99538 433 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 FERMT1Q9BQL6 677 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 C11orf49Q9H6J7 331 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 CNOT10Q9H9A5 744 aaKnown RBP9.03□□□□□ -0.96
SMAD4-206ENST00000588860 NMUR1Q9HB89 426 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 ETNK1Q9HBU6 452 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 ARHGEF38Q9NXL2 777 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 SEPT10Q9P0V9 454 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 CTNNAL1Q9UBT7 734 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 SFMBT1Q9UHJ3 866 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 CHMP2BQ9UQN3 213 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms