RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 MYLIPQ8WY64 445 aa14.5□□□□□ -0.09
NLE1-205ENST00000588642 USP13Q92995 863 aaPredicted RBP14.5□□□□□ -0.09
NLE1-205ENST00000588642 RPGRIP1Q96KN7 1286 aa14.5□□□□□ -0.09
NLE1-205ENST00000588642 ARHGEF4Q9NR80 690 aa14.5□□□□□ -0.09
NLE1-205ENST00000588642 VANGL2Q9ULK5 521 aa14.5□□□□□ -0.09
NLE1-205ENST00000588642 ZNF510Q9Y2H8 683 aa14.5□□□□□ -0.09
NLE1-205ENST00000588642 NR2E1Q9Y466 385 aa14.5□□□□□ -0.09
NLE1-205ENST00000588642 GREB1Q4ZG55 1949 aa14.5□□□□□ -0.09
NLE1-205ENST00000588642 MYO16Q9Y6X6 1858 aa14.5□□□□□ -0.09
NLE1-205ENST00000588642 F5H5T6 163 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 SCAMP3O14828 347 aaKnown RBP14.49□□□□□ -0.09
NLE1-205ENST00000588642 LATS1O95835 1130 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 ERCC2P18074 760 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 LTBRP36941 435 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 MTHFRP42898 656 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 C2orf54Q08AI8 447 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 KLF1Q13351 362 aaPredicted RBP14.49□□□□□ -0.09
NLE1-205ENST00000588642 DPYSQ14117 519 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 SIX1Q15475 284 aaPredicted RBP14.49□□□□□ -0.09
NLE1-205ENST00000588642 CCDC85BQ15834 202 aaPredicted RBP14.49□□□□□ -0.09
NLE1-205ENST00000588642 ADGRF1Q5T601 910 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 SLC9A4Q6AI14 798 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 FBXL22Q6P050 247 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 RFWD3Q6PCD5 774 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 HTR3DQ70Z44 454 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 Q7L0L9 218 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 NPAS3Q8IXF0 933 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 KLHL7Q8IXQ5 586 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 ZDHHC14Q8IZN3 488 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 PLD5Q8N7P1 536 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 PRELID2Q8N945 189 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 TTC13Q8NBP0 860 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 FGF13Q92913 245 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 MAGOHBQ96A72 148 aaKnown RBP14.49□□□□□ -0.09
NLE1-205ENST00000588642 HAUS1Q96CS2 278 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 RPRD1AQ96P16 312 aaPredicted RBP14.49□□□□□ -0.09
NLE1-205ENST00000588642 CDX2Q99626 313 aaPredicted RBP14.49□□□□□ -0.09
NLE1-205ENST00000588642 PRMT1Q99873 361 aaKnown RBP14.49□□□□□ -0.09
NLE1-205ENST00000588642 CATSPERBQ9H7T0 1116 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 HOMER3Q9NSC5 361 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 RBM12Q9NTZ6 932 aaKnown RBP14.49□□□□□ -0.09
NLE1-205ENST00000588642 ETNK2Q9NVF9 386 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 GDE1Q9NZC3 331 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 CCL26Q9Y258 94 aa14.49□□□□□ -0.09
NLE1-205ENST00000588642 R3HDM2Q9Y2K5 976 aaKnown RBP14.49□□□□□ -0.09
NLE1-205ENST00000588642 E2F8A0AVK6 867 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 DRGXA6NNA5 263 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 CCDC188H7C350 402 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 TRDMT1O14717 391 aaKnown RBP14.48□□□□□ -0.09
NLE1-205ENST00000588642 FGF10O15520 208 aaPredicted RBP14.48□□□□□ -0.09
NLE1-205ENST00000588642 TSPAN3O60637 253 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 PRAMEF12O95522 483 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 TGM2P21980 687 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 SNX1Q13596 522 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 COL19A1Q14993 1142 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 SKIV2LQ15477 1246 aaKnown RBP14.48□□□□□ -0.09
NLE1-205ENST00000588642 FAM133BQ5BKY9 247 aaKnown RBP14.48□□□□□ -0.09
NLE1-205ENST00000588642 RABGAP1LQ5R372 815 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 MANEALQ5VSG8 457 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 POTEHQ6S545 545 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 TMCO3Q6UWJ1 677 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 Q6ZNB5 142 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 P3H4Q92791 437 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 MSLNLQ96KJ4 702 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 FAM118BQ9BPY3 351 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 ZYG11BQ9C0D3 744 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 MPP6Q9NZW5 540 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 SAE1Q9UBE0 346 aaPredicted RBP14.48□□□□□ -0.09
NLE1-205ENST00000588642 CD207Q9UJ71 328 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 CDH7Q9ULB5 785 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 HEY1Q9Y5J3 304 aa14.48□□□□□ -0.09
NLE1-205ENST00000588642 MTCL1Q9Y4B5 1905 aaKnown RBP14.47□□□□□ -0.09
NLE1-205ENST00000588642 APOC4-APOC2K7ER74 178 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 DCLK1O15075 740 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 GREM1O60565 184 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 APOC2P02655 101 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 RHOQP17081 205 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 WEE1P30291 646 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 SLC6A4P31645 630 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 OTUD4Q01804 1114 aaKnown RBP14.47□□□□□ -0.09
NLE1-205ENST00000588642 CCNG2Q16589 344 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 FAM78AQ5JUQ0 283 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 HABP4Q5JVS0 413 aaKnown RBP14.47□□□□□ -0.09
NLE1-205ENST00000588642 NCBP2-AS2Q69YL0 99 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 GPR153Q6NV75 609 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 NPNTQ6UXI9 565 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 ZNF683Q8IZ20 524 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 DEFB123Q8N688 67 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 CELF5Q8N6W0 485 aaKnown RBP14.47□□□□□ -0.09
NLE1-205ENST00000588642 LRRN4CLQ8ND94 238 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 ACTL9Q8TC94 416 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 PPM1EQ8WY54 764 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 ATG4AQ8WYN0 398 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 SMARCD2Q92925 531 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 IGSF8Q969P0 613 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 KRT12Q99456 494 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 FRMD8P1Q9BZ68 369 aaPredicted RBP14.47□□□□□ -0.09
NLE1-205ENST00000588642 KIF9Q9HAQ2 790 aa14.47□□□□□ -0.09
NLE1-205ENST00000588642 PPARGC1AQ9UBK2 798 aaKnown RBP14.47□□□□□ -0.09
NLE1-205ENST00000588642 STOML2Q9UJZ1 356 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms