RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 GGA2Q9UJY4 613 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 NOCTQ9UK39 431 aaKnown RBP10.26□□□□□ -0.77
SKA2-208ENST00000583927 USP18Q9UMW8 372 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 STON1Q9Y6Q2 735 aa10.26□□□□□ -0.77
SKA2-208ENST00000583927 KNL1Q8NG31 2342 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 PCDH15Q96QU1 1955 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 SMTNL1A8MU46 457 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 DCLK1O15075 740 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 TSPAN3O60637 253 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 TBL1XO60907 577 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 F9P00740 461 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 IGLV3-19P01714 112 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 CYP1A1P04798 512 aaPredicted RBP10.25□□□□□ -0.77
SKA2-208ENST00000583927 ATP5BP06576 529 aaKnown RBP10.25□□□□□ -0.77
SKA2-208ENST00000583927 DLDP09622 509 aaKnown RBP10.25□□□□□ -0.77
SKA2-208ENST00000583927 PABPC1P11940 636 aaKnown RBP10.25□□□□□ -0.77
SKA2-208ENST00000583927 NDUFV2P19404 249 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 PTMSP20962 102 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 CDK11BP21127 795 aaKnown RBP10.25□□□□□ -0.77
SKA2-208ENST00000583927 MPLP40238 635 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 VASPP50552 380 aaPredicted RBP10.25□□□□□ -0.77
SKA2-208ENST00000583927 SGSHP51688 502 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 GSCP56915 257 aaPredicted RBP10.25□□□□□ -0.77
SKA2-208ENST00000583927 POLR2FP61218 127 aaKnown RBP10.25□□□□□ -0.77
SKA2-208ENST00000583927 PITX1P78337 314 aaPredicted RBP10.25□□□□□ -0.77
SKA2-208ENST00000583927 CDR2Q01850 454 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 CAMK2GQ13555 558 aaPredicted RBP10.25□□□□□ -0.77
SKA2-208ENST00000583927 ZNF234Q14588 700 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 SYCP1Q15431 976 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 KLHL40Q2TBA0 621 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 C5orf22Q49AR2 442 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 ZC3H12AQ5D1E8 599 aaKnown RBP10.25□□□□□ -0.77
SKA2-208ENST00000583927 BRMS1LQ5PSV4 323 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 PEAR1Q5VY43 1037 aaPredicted RBP10.25□□□□□ -0.77
SKA2-208ENST00000583927 KIAA1211LQ6NV74 962 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 RFWD3Q6PCD5 774 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 TRIM72Q6ZMU5 477 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 BNIPLQ7Z465 357 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 ERICH1Q86X53 443 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 XYLT1Q86Y38 959 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 ADAM32Q8TC27 787 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 MRGPRX1Q96LB2 322 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 NPY6RQ99463 290 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 RTKNQ9BST9 563 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 FUCA2Q9BTY2 467 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 NUCKS1Q9H1E3 243 aaKnown RBP10.25□□□□□ -0.77
SKA2-208ENST00000583927 ARRDC1-AS1Q9H2J1 176 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 PDCL3Q9H2J4 239 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 SYNCQ9H7C4 482 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 FAM207AQ9NSI2 230 aaPredicted RBP10.25□□□□□ -0.77
SKA2-208ENST00000583927 ABCB8Q9NUT2 735 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 DDIT4Q9NX09 232 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 CALCOCO1Q9P1Z2 691 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 BCCIPQ9P287 314 aaKnown RBP eCLIP10.25□□□□□ -0.77
SKA2-208ENST00000583927 MBD1Q9UIS9 605 aaPredicted RBP10.25□□□□□ -0.77
SKA2-208ENST00000583927 STAP1Q9ULZ2 295 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 MYO6Q9UM54 1294 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 PLA2G4CQ9UP65 541 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 PAXBP1Q9Y5B6 917 aa10.25□□□□□ -0.77
SKA2-208ENST00000583927 CABIN1Q9Y6J0 2220 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 IGHV1OR15-9A0A0B4J2B8 117 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 GOLGA6L7A0A1B0GV03 622 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 WASH3PC4AMC7 463 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 EPHB6O15197 1021 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 AP5Z1O43299 807 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 LUC7L3O95232 432 aaKnown RBP10.24□□□□□ -0.77
SKA2-208ENST00000583927 ASLP04424 464 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 MMEP08473 750 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 ABCB4P21439 1286 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 TACR2P21452 398 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 BCKDHBP21953 392 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 MMP8P22894 467 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 STAT1P42224 750 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 CXCR3P49682 368 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 KLK7P49862 253 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 OXCT1P55809 520 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 RPS24P62847 133 aaKnown RBP10.24□□□□□ -0.77
SKA2-208ENST00000583927 FMO1Q01740 532 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 UBXN1Q04323 297 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 PTPRNQ16849 979 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 RSPO4Q2I0M5 234 aaPredicted RBP10.24□□□□□ -0.77
SKA2-208ENST00000583927 SLC25A52Q3SY17 297 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 FUT11Q495W5 492 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 ANO6Q4KMQ2 910 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 MBLAC2Q68D91 279 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 CHST9Q7L1S5 443 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 LPCAT2Q7L5N7 544 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 MFN1Q8IWA4 741 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 CCDC117Q8IWD4 279 aaPredicted RBP10.24□□□□□ -0.77
SKA2-208ENST00000583927 DHX40Q8IX18 779 aaKnown RBP10.24□□□□□ -0.77
SKA2-208ENST00000583927 PGBD3Q8N328 593 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 AOPEPQ8N6M6 819 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 NEK11Q8NG66 645 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 WFDC5Q8TCV5 224 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 SPAG5Q96R06 1193 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 CIPCQ9C0C6 399 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 FAM204AQ9H8W3 233 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 PRDM16Q9HAZ2 1276 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 ARHGEF38Q9NXL2 777 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms