RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 CHKAP35790 457 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 VCPP55072 806 aaKnown RBP11.32□□□□□ -0.6
TOP3A-216ENST00000583804 AMPD2Q01433 879 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 SLC25A11Q02978 314 aaKnown RBP11.32□□□□□ -0.6
TOP3A-216ENST00000583804 FCHO2Q0JRZ9 810 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 PDGFRLQ15198 375 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 BOLA3Q53S33 107 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 MS4A13Q5J8X5 152 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 NADSYN1Q6IA69 706 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 RFWD3Q6PCD5 774 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 TPGS1Q6ZTW0 290 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 RHOT1Q8IXI2 618 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 LRRN4CLQ8ND94 238 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 TTC8Q8TAM2 541 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 TSC1Q92574 1164 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 CD101Q93033 1021 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 NTAN1Q96AB6 310 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 HES6Q96HZ4 224 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 SNRNP25Q9BV90 132 aaKnown RBP11.32□□□□□ -0.6
TOP3A-216ENST00000583804 EBF3Q9H4W6 596 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 DHX35Q9H5Z1 703 aaKnown RBP11.32□□□□□ -0.6
TOP3A-216ENST00000583804 AP4E1Q9UPM8 1137 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 HS3ST4Q9Y661 456 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 SAR1BQ9Y6B6 198 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 C5orf42Q9H799 3197 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 NUP210Q8TEM1 1887 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-216ENST00000583804 CUL9Q8IWT3 2517 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 LRRD1A4D1F6 860 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 F5H5T6 163 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 CHADO15335 359 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 SLU7O95391 586 aaKnown RBP11.32□□□□□ -0.6
TOP3A-216ENST00000583804 KRT7P08729 469 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 CD48P09326 243 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 PYGMP11217 842 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 ARSAP15289 507 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 CTNNA2P26232 953 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 SLC6A4P31645 630 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 AIF1P55008 147 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 MLLT6P55198 1093 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-216ENST00000583804 TNK2Q07912 1038 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 TDGQ13569 410 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 AUHQ13825 339 aaKnown RBP11.32□□□□□ -0.6
TOP3A-216ENST00000583804 CA9Q16790 459 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 ANO4Q32M45 955 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 EML3Q32P44 896 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 ODF2Q5BJF6 829 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 FAM133BQ5BKY9 247 aaKnown RBP11.32□□□□□ -0.6
TOP3A-216ENST00000583804 PPP6R3Q5H9R7 873 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-216ENST00000583804 PIK3R6Q5UE93 754 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 PAPD7Q5XG87 772 aaKnown RBP11.32□□□□□ -0.6
TOP3A-216ENST00000583804 KAZNQ674X7 775 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 LRRC31Q6UY01 552 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 ANKS1BQ7Z6G8 1248 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 C14orf80Q86SX3 495 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.32□□□□□ -0.6
TOP3A-216ENST00000583804 ADGRG2Q8IZP9 1017 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 LGI2Q8N0V4 545 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 PYROXD2Q8N2H3 581 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 KIAA1958Q8N8K9 716 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 RAPGEF5Q92565 580 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 IRF7Q92985 503 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 BHMTQ93088 406 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 OTUB2Q96DC9 234 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 ASIC4Q96FT7 647 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 FAM83CQ9BQN1 747 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 OSBPL2Q9H1P3 480 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.32□□□□□ -0.6
TOP3A-216ENST00000583804 OR12D3Q9UGF7 316 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 VANGL2Q9ULK5 521 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 HELZP42694 1942 aaKnown RBP11.31□□□□□ -0.6
TOP3A-216ENST00000583804 C19orf67A6NJJ6 358 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 PDE2AO00408 941 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-216ENST00000583804 PSTPIP1O43586 416 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 CREB3O43889 395 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 NFATC1O95644 943 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 CYBBP04839 570 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 RWDD2BP57060 319 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 C2orf54Q08AI8 447 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 SCAPQ12770 1279 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 MMRN1Q13201 1228 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 KRT81Q14533 505 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 LY6G5CQ5SRR4 150 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 SEL1L2Q5TEA6 688 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 CCDC181Q5TID7 509 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 FBXL22Q6P050 247 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 CYP4V2Q6ZWL3 525 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-216ENST00000583804 TMEM25Q86YD3 366 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 PSTKQ8IV42 348 aaKnown RBP11.31□□□□□ -0.6
TOP3A-216ENST00000583804 CFAP52Q8N1V2 620 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 KCTD6Q8NC69 237 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 CSGALNACT1Q8TDX6 532 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 DDI1Q8WTU0 396 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 TEKT4Q8WW24 435 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 ATP2A3Q93084 1043 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 TMA16Q96EY4 203 aaKnown RBP11.31□□□□□ -0.6
TOP3A-216ENST00000583804 C1orf74Q96LT6 269 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 RPRD1AQ96P16 312 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-216ENST00000583804 EPAS1Q99814 870 aa11.31□□□□□ -0.6
TOP3A-216ENST00000583804 PRMT1Q99873 361 aaKnown RBP11.31□□□□□ -0.6
TOP3A-216ENST00000583804 HERPUD2Q9BSE4 406 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms