RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 TAB3Q8N5C8 712 aaPredicted RBP9.59□□□□□ -0.87
SS18-220ENST00000582092 EFHBQ8N7U6 833 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 OR2W6PQ8NHA6 318 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 RIN2Q8WYP3 895 aaPredicted RBP9.59□□□□□ -0.87
SS18-220ENST00000582092 FBXO32Q969P5 355 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 NT5C3BQ969T7 300 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 EXOC4Q96A65 974 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 PGAP3Q96FM1 320 aaPredicted RBP9.59□□□□□ -0.87
SS18-220ENST00000582092 PGLYRP2Q96PD5 576 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 SH3GL2Q99962 352 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 TCF25Q9BQ70 676 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 FRMD8Q9BZ67 464 aaPredicted RBP9.59□□□□□ -0.87
SS18-220ENST00000582092 TKTL2Q9H0I9 626 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 SIK2Q9H0K1 926 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 VPS37BQ9H9H4 285 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 TLR8Q9NR97 1041 aaKnown RBP9.59□□□□□ -0.87
SS18-220ENST00000582092 PIGVQ9NUD9 493 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 DNAJC17Q9NVM6 304 aaKnown RBP9.59□□□□□ -0.87
SS18-220ENST00000582092 DONSONQ9NYP3 566 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 CWC15Q9P013 229 aaKnown RBP9.59□□□□□ -0.87
SS18-220ENST00000582092 SEPT10Q9P0V9 454 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 XPO7Q9UIA9 1087 aaKnown RBP9.59□□□□□ -0.87
SS18-220ENST00000582092 RAD54BQ9Y620 910 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 USP3Q9Y6I4 520 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 A0A087WUV0 522 aaPredicted RBP9.58□□□□□ -0.88
SS18-220ENST00000582092 TTC4O95801 387 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 APOEP02649 317 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 NUDT17P0C025 328 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 MX2P20592 715 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 IL4RP24394 825 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 RBL1P28749 1068 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 ELF1P32519 619 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 CXCR3P49682 368 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 HYAL1Q12794 435 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 PDIA2Q13087 525 aaKnown RBP9.58□□□□□ -0.88
SS18-220ENST00000582092 GPR17Q13304 367 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 ADAM15Q13444 863 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 STAT4Q14765 748 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 PSMD5Q16401 504 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 KYNUQ16719 465 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 DDR2Q16832 855 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 DNAJC21Q5F1R6 531 aaKnown RBP9.58□□□□□ -0.88
SS18-220ENST00000582092 PLPP4Q5VZY2 271 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 ELMSAN1Q6PJG2 1045 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 LRRC31Q6UY01 552 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 DENND5BQ6ZUT9 1274 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 CYP4V2Q6ZWL3 525 aaPredicted RBP9.58□□□□□ -0.88
SS18-220ENST00000582092 TAOK1Q7L7X3 1001 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 DDX53Q86TM3 631 aaKnown RBP9.58□□□□□ -0.88
SS18-220ENST00000582092 PRUNE1Q86TP1 453 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 RBM23Q86U06 439 aaKnown RBP9.58□□□□□ -0.88
SS18-220ENST00000582092 VPS52Q8N1B4 723 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 PYROXD2Q8N2H3 581 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 PQLC3Q8N755 202 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 SCAMP5Q8TAC9 235 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 UHMK1Q8TAS1 419 aaKnown RBP9.58□□□□□ -0.88
SS18-220ENST00000582092 PYROXD1Q8WU10 500 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 PIK3R5Q8WYR1 880 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 IGSF21Q96ID5 467 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 SERPINB11Q96P15 392 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 CDK5RAP1Q96SZ6 601 aaKnown RBP9.58□□□□□ -0.88
SS18-220ENST00000582092 PKMYT1Q99640 499 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 GPR62Q9BZJ7 368 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 NACA2Q9H009 215 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 BRD8Q9H0E9 1235 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 CDC42EP4Q9H3Q1 356 aaKnown RBP9.58□□□□□ -0.88
SS18-220ENST00000582092 CATSPERBQ9H7T0 1116 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 C10orf88Q9H8K7 445 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 RAB6BQ9NRW1 208 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 OR12D3Q9UGF7 316 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 PRKAG3Q9UGI9 489 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 CD207Q9UJ71 328 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 SCML2Q9UQR0 700 aa9.58□□□□□ -0.88
SS18-220ENST00000582092 CUL9Q8IWT3 2517 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.57□□□□□ -0.88
SS18-220ENST00000582092 A0A1W2PQH9 124 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 GRXCR2A6NFK2 248 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 H3BQ06 376 aaPredicted RBP9.57□□□□□ -0.88
SS18-220ENST00000582092 GOLGA8MH3BSY2 632 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 CHADO15335 359 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 MTSS1O43312 755 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 B4GALT3O60512 393 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 CXCL14O95715 111 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 NR1D1P20393 614 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 DNAJB1P25685 340 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 EPHB2P29323 1055 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 GBP2P32456 591 aaPredicted RBP9.57□□□□□ -0.88
SS18-220ENST00000582092 HPDP32754 393 aaPredicted RBP9.57□□□□□ -0.88
SS18-220ENST00000582092 HTR7P34969 479 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 IRS1P35568 1242 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 FDFT1P37268 417 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 ALDH1A3P47895 512 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 KPNA1P52294 538 aaPredicted RBP9.57□□□□□ -0.88
SS18-220ENST00000582092 GYS2P54840 703 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 ERVFC1P60507 584 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 ZNF844Q08AG5 666 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 SCAPQ12770 1279 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 MTA1Q13330 715 aa9.57□□□□□ -0.88
SS18-220ENST00000582092 SMAD4Q13485 552 aaKnown RBP9.57□□□□□ -0.88
SS18-220ENST00000582092 CAMK1Q14012 370 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms