RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 ZC3H12AQ5D1E8 599 aaKnown RBP18.08■□□□□ 0.48
SMG6-214ENST00000573827 TCP11X2Q5H9J9 407 aa18.08■□□□□ 0.48
SMG6-214ENST00000573827 SLC23A3Q6PIS1 610 aa18.08■□□□□ 0.48
SMG6-214ENST00000573827 CHST9Q7L1S5 443 aa18.08■□□□□ 0.48
SMG6-214ENST00000573827 DEFB119Q8N690 84 aa18.08■□□□□ 0.48
SMG6-214ENST00000573827 HJURPQ8NCD3 748 aaPredicted RBP18.08■□□□□ 0.48
SMG6-214ENST00000573827 C1orf131Q8NDD1 294 aaKnown RBP18.08■□□□□ 0.48
SMG6-214ENST00000573827 FIBINQ8TAL6 211 aa18.08■□□□□ 0.48
SMG6-214ENST00000573827 ENOX1Q8TC92 643 aaKnown RBP18.08■□□□□ 0.48
SMG6-214ENST00000573827 DDX1Q92499 740 aaKnown RBP18.08■□□□□ 0.48
SMG6-214ENST00000573827 PPP1R13BQ96KQ4 1090 aa18.08■□□□□ 0.48
SMG6-214ENST00000573827 PRMT1Q99873 361 aaKnown RBP18.08■□□□□ 0.48
SMG6-214ENST00000573827 ADAM33Q9BZ11 813 aa18.08■□□□□ 0.48
SMG6-214ENST00000573827 PRDM16Q9HAZ2 1276 aa18.08■□□□□ 0.48
SMG6-214ENST00000573827 CAPN10Q9HC96 672 aa18.08■□□□□ 0.48
SMG6-214ENST00000573827 WSB2Q9NYS7 404 aaPredicted RBP18.08■□□□□ 0.48
SMG6-214ENST00000573827 DACH1Q9UI36 760 aa18.08■□□□□ 0.48
SMG6-214ENST00000573827 NFE2L3Q9Y4A8 694 aa18.08■□□□□ 0.48
SMG6-214ENST00000573827 ATXN2Q99700 1313 aaKnown RBP18.07■□□□□ 0.48
SMG6-214ENST00000573827 C4orf47A7E2U8 309 aa18.07■□□□□ 0.48
SMG6-214ENST00000573827 AP5Z1O43299 807 aa18.07■□□□□ 0.48
SMG6-214ENST00000573827 PRKCSHP14314 528 aaPredicted RBP18.07■□□□□ 0.48
SMG6-214ENST00000573827 EEF1GP26641 437 aaKnown RBP18.07■□□□□ 0.48
SMG6-214ENST00000573827 CDH5P33151 784 aaPredicted RBP18.07■□□□□ 0.48
SMG6-214ENST00000573827 PTK2Q05397 1052 aa18.07■□□□□ 0.48
SMG6-214ENST00000573827 ZNF33AQ06730 810 aa18.07■□□□□ 0.48
SMG6-214ENST00000573827 LMAN2Q12907 356 aa18.07■□□□□ 0.48
SMG6-214ENST00000573827 DRAP1Q14919 205 aaPredicted RBP18.07■□□□□ 0.48
SMG6-214ENST00000573827 DCAF6Q58WW2 860 aa18.07■□□□□ 0.48
SMG6-214ENST00000573827 TRIM61Q5EBN2 209 aa18.07■□□□□ 0.48
SMG6-214ENST00000573827 FSCBQ5H9T9 825 aa18.07■□□□□ 0.48
SMG6-214ENST00000573827 MBLAC2Q68D91 279 aa18.07■□□□□ 0.48
SMG6-214ENST00000573827 KIAA1324Q6UXG2 1013 aaKnown RBP18.07■□□□□ 0.48
SMG6-214ENST00000573827 FAM183BPQ6ZVS7 135 aa18.07■□□□□ 0.48
SMG6-214ENST00000573827 TMPRSS6Q8IU80 811 aa18.07■□□□□ 0.48
SMG6-214ENST00000573827 DEFB106AQ8N104 65 aa18.07■□□□□ 0.48
SMG6-214ENST00000573827 AHI1Q8N157 1196 aa18.07■□□□□ 0.48
SMG6-214ENST00000573827 TTC17Q96AE7 1141 aa18.07■□□□□ 0.48
SMG6-214ENST00000573827 TRIM62Q9BVG3 475 aa18.07■□□□□ 0.48
SMG6-214ENST00000573827 ZZEF1O43149 2961 aa18.07■□□□□ 0.48
SMG6-214ENST00000573827 EPHX1P07099 455 aa18.06■□□□□ 0.48
SMG6-214ENST00000573827 DLDP09622 509 aaKnown RBP18.06■□□□□ 0.48
SMG6-214ENST00000573827 TPMTP51580 245 aa18.06■□□□□ 0.48
SMG6-214ENST00000573827 IL31Q6EBC2 164 aa18.06■□□□□ 0.48
SMG6-214ENST00000573827 SERPINA13PQ6UXR4 307 aa18.06■□□□□ 0.48
SMG6-214ENST00000573827 MMS22LQ6ZRQ5 1243 aa18.06■□□□□ 0.48
SMG6-214ENST00000573827 SLC26A9Q7LBE3 791 aa18.06■□□□□ 0.48
SMG6-214ENST00000573827 ZNF366Q8N895 744 aa18.06■□□□□ 0.48
SMG6-214ENST00000573827 OR2T3Q8NH03 318 aa18.06■□□□□ 0.48
SMG6-214ENST00000573827 MRGPRX3Q96LB0 322 aa18.06■□□□□ 0.48
SMG6-214ENST00000573827 GANQ9H2C0 597 aa18.06■□□□□ 0.48
SMG6-214ENST00000573827 PLCB1Q9NQ66 1216 aa18.06■□□□□ 0.48
SMG6-214ENST00000573827 CABIN1Q9Y6J0 2220 aa18.06■□□□□ 0.48
SMG6-214ENST00000573827 CAPN9O14815 690 aa18.05■□□□□ 0.48
SMG6-214ENST00000573827 HSF2BPO75031 334 aa18.05■□□□□ 0.48
SMG6-214ENST00000573827 MOCS2O96007 188 aaPredicted RBP18.05■□□□□ 0.48
SMG6-214ENST00000573827 UCHL3P15374 230 aa18.05■□□□□ 0.48
SMG6-214ENST00000573827 CYP11B1P15538 503 aa18.05■□□□□ 0.48
SMG6-214ENST00000573827 CD6P30203 668 aa18.05■□□□□ 0.48
SMG6-214ENST00000573827 E2F5Q15329 346 aa18.05■□□□□ 0.48
SMG6-214ENST00000573827 ARTNQ5T4W7 220 aa18.05■□□□□ 0.48
SMG6-214ENST00000573827 C11orf57Q6ZUT1 292 aaPredicted RBP18.05■□□□□ 0.48
SMG6-214ENST00000573827 MFN1Q8IWA4 741 aa18.05■□□□□ 0.48
SMG6-214ENST00000573827 CFAP52Q8N1V2 620 aa18.05■□□□□ 0.48
SMG6-214ENST00000573827 ZNF397Q8NF99 534 aaPredicted RBP18.05■□□□□ 0.48
SMG6-214ENST00000573827 SIPA1Q96FS4 1042 aa18.05■□□□□ 0.48
SMG6-214ENST00000573827 TOE1Q96GM8 510 aaKnown RBP18.05■□□□□ 0.48
SMG6-214ENST00000573827 BTN2A3PQ96KV6 586 aa18.05■□□□□ 0.48
SMG6-214ENST00000573827 HSPA12BQ96MM6 686 aa18.05■□□□□ 0.48
SMG6-214ENST00000573827 DDX50Q9BQ39 737 aaKnown RBP18.05■□□□□ 0.48
SMG6-214ENST00000573827 PRSS16Q9NQE7 514 aa18.05■□□□□ 0.48
SMG6-214ENST00000573827 TAB2Q9NYJ8 693 aa18.05■□□□□ 0.48
SMG6-214ENST00000573827 STIM2Q9P246 746 aa18.05■□□□□ 0.48
SMG6-214ENST00000573827 I6L893 689 aaPredicted RBP18.04■□□□□ 0.48
SMG6-214ENST00000573827 ZBTB24O43167 697 aaPredicted RBP18.04■□□□□ 0.48
SMG6-214ENST00000573827 SYNCRIPO60506 623 aaKnown RBP18.04■□□□□ 0.48
SMG6-214ENST00000573827 GRAP2O75791 330 aa18.04■□□□□ 0.48
SMG6-214ENST00000573827 LUC7L3O95232 432 aaKnown RBP18.04■□□□□ 0.48
SMG6-214ENST00000573827 TACR2P21452 398 aa18.04■□□□□ 0.48
SMG6-214ENST00000573827 CSKP41240 450 aa18.04■□□□□ 0.48
SMG6-214ENST00000573827 DPP6P42658 865 aa18.04■□□□□ 0.48
SMG6-214ENST00000573827 GABRB2P47870 512 aa18.04■□□□□ 0.48
SMG6-214ENST00000573827 SLC6A3Q01959 620 aa18.04■□□□□ 0.48
SMG6-214ENST00000573827 KRT31Q15323 416 aa18.04■□□□□ 0.48
SMG6-214ENST00000573827 EFHC1Q5JVL4 640 aa18.04■□□□□ 0.48
SMG6-214ENST00000573827 RAP1GAP2Q684P5 730 aa18.04■□□□□ 0.48
SMG6-214ENST00000573827 DNASE2BQ8WZ79 361 aa18.04■□□□□ 0.48
SMG6-214ENST00000573827 NT5C3BQ969T7 300 aa18.04■□□□□ 0.48
SMG6-214ENST00000573827 HSD3B7Q9H2F3 369 aa18.04■□□□□ 0.48
SMG6-214ENST00000573827 TMEM9BQ9NQ34 198 aa18.04■□□□□ 0.48
SMG6-214ENST00000573827 FSCN3Q9NQT6 498 aa18.04■□□□□ 0.48
SMG6-214ENST00000573827 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.04■□□□□ 0.48
SMG6-214ENST00000573827 WDFY3Q8IZQ1 3526 aa18.03■□□□□ 0.48
SMG6-214ENST00000573827 F8VZ95 297 aa18.03■□□□□ 0.48
SMG6-214ENST00000573827 EPHB6O15197 1021 aa18.03■□□□□ 0.48
SMG6-214ENST00000573827 DAB1O75553 588 aa18.03■□□□□ 0.48
SMG6-214ENST00000573827 KCNK5O95279 499 aa18.03■□□□□ 0.48
SMG6-214ENST00000573827 APOEP02649 317 aa18.03■□□□□ 0.48
SMG6-214ENST00000573827 SERPINF2P08697 491 aa18.03■□□□□ 0.48
SMG6-214ENST00000573827 ENGP17813 658 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms