RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 CCDC183Q5T5S1 534 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 LYSMD4Q5XG99 296 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 MBLAC2Q68D91 279 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 SDE2Q6IQ49 451 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 TRNP1Q6NT89 227 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 SLC23A3Q6PIS1 610 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 SYT12Q8IV01 421 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 AHI1Q8N157 1196 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 DEFB119Q8N690 84 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 ZNF366Q8N895 744 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 FIBINQ8TAL6 211 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 PIGKQ92643 395 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 TTC17Q96AE7 1141 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 ZNF419Q96HQ0 510 aaPredicted RBP17.95■□□□□ 0.46
SMG6-212ENST00000573153 PPP1R13BQ96KQ4 1090 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 LSM14BQ9BX40 385 aaKnown RBP17.95■□□□□ 0.46
SMG6-212ENST00000573153 CAPN10Q9HC96 672 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 TAB2Q9NYJ8 693 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 WSB2Q9NYS7 404 aaPredicted RBP17.95■□□□□ 0.46
SMG6-212ENST00000573153 DAAM1Q9Y4D1 1078 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 GON4LQ3T8J9 2241 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 C10orf142B7Z368 130 aa17.94■□□□□ 0.46
SMG6-212ENST00000573153 TIMM44O43615 452 aa17.94■□□□□ 0.46
SMG6-212ENST00000573153 UCHL3P15374 230 aa17.94■□□□□ 0.46
SMG6-212ENST00000573153 CYP11B1P15538 503 aa17.94■□□□□ 0.46
SMG6-212ENST00000573153 TFE3P19532 575 aaPredicted RBP17.94■□□□□ 0.46
SMG6-212ENST00000573153 IRAK1P51617 712 aa17.94■□□□□ 0.46
SMG6-212ENST00000573153 RPL6Q02878 288 aaKnown RBP17.94■□□□□ 0.46
SMG6-212ENST00000573153 ZNF33AQ06730 810 aa17.94■□□□□ 0.46
SMG6-212ENST00000573153 BYSLQ13895 437 aaKnown RBP17.94■□□□□ 0.46
SMG6-212ENST00000573153 KRT31Q15323 416 aa17.94■□□□□ 0.46
SMG6-212ENST00000573153 E2F5Q15329 346 aa17.94■□□□□ 0.46
SMG6-212ENST00000573153 STX1AQ16623 288 aa17.94■□□□□ 0.46
SMG6-212ENST00000573153 SASS6Q6UVJ0 657 aa17.94■□□□□ 0.46
SMG6-212ENST00000573153 SLC36A4Q6YBV0 504 aa17.94■□□□□ 0.46
SMG6-212ENST00000573153 MMS22LQ6ZRQ5 1243 aa17.94■□□□□ 0.46
SMG6-212ENST00000573153 SLC26A9Q7LBE3 791 aa17.94■□□□□ 0.46
SMG6-212ENST00000573153 APTXQ7Z2E3 356 aaKnown RBP17.94■□□□□ 0.46
SMG6-212ENST00000573153 TMPRSS6Q8IU80 811 aa17.94■□□□□ 0.46
SMG6-212ENST00000573153 HJURPQ8NCD3 748 aaPredicted RBP17.94■□□□□ 0.46
SMG6-212ENST00000573153 ZNF397Q8NF99 534 aaPredicted RBP17.94■□□□□ 0.46
SMG6-212ENST00000573153 UCMAQ8WVF2 138 aa17.94■□□□□ 0.46
SMG6-212ENST00000573153 PRDM16Q9HAZ2 1276 aa17.94■□□□□ 0.46
SMG6-212ENST00000573153 FSCN3Q9NQT6 498 aa17.94■□□□□ 0.46
SMG6-212ENST00000573153 CNOT1A5YKK6 2376 aaKnown RBP17.94■□□□□ 0.46
SMG6-212ENST00000573153 NYNRINQ9P2P1 1898 aaKnown RBP17.93■□□□□ 0.46
SMG6-212ENST00000573153 F8VZ95 297 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 AP5Z1O43299 807 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 DAB1O75553 588 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 GRAP2O75791 330 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 DLDP09622 509 aaKnown RBP17.93■□□□□ 0.46
SMG6-212ENST00000573153 GABRB2P47870 512 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 TPMTP51580 245 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 MYL5Q02045 173 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 NCAPHQ15003 741 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 TRIM61Q5EBN2 209 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 RAP1GAP2Q684P5 730 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 KIAA1324Q6UXG2 1013 aaKnown RBP17.93■□□□□ 0.46
SMG6-212ENST00000573153 SERPINA13PQ6UXR4 307 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 BNIPLQ7Z465 357 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 NOP9Q86U38 636 aaKnown RBP17.93■□□□□ 0.46
SMG6-212ENST00000573153 CFAP52Q8N1V2 620 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 OR52K2Q8NGK3 314 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 EPS8L1Q8TE68 723 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 NT5C3BQ969T7 300 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 NOX5Q96PH1 765 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 STK33Q9BYT3 514 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 MTG2Q9H4K7 406 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 PRSS16Q9NQE7 514 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 SIK3Q9Y2K2 1263 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 PI4KAP42356 2102 aa17.93■□□□□ 0.46
SMG6-212ENST00000573153 LRRC10BA6NIK2 292 aa17.92■□□□□ 0.46
SMG6-212ENST00000573153 C4orf47A7E2U8 309 aa17.92■□□□□ 0.46
SMG6-212ENST00000573153 KHNYNO15037 678 aaKnown RBP17.92■□□□□ 0.46
SMG6-212ENST00000573153 HSF2BPO75031 334 aa17.92■□□□□ 0.46
SMG6-212ENST00000573153 LUC7L3O95232 432 aaKnown RBP17.92■□□□□ 0.46
SMG6-212ENST00000573153 MOCS2O96007 188 aaPredicted RBP17.92■□□□□ 0.46
SMG6-212ENST00000573153 EPHX1P07099 455 aa17.92■□□□□ 0.46
SMG6-212ENST00000573153 TACR2P21452 398 aa17.92■□□□□ 0.46
SMG6-212ENST00000573153 CD6P30203 668 aa17.92■□□□□ 0.46
SMG6-212ENST00000573153 HOXD12P35452 270 aa17.92■□□□□ 0.46
SMG6-212ENST00000573153 KRT9P35527 623 aa17.92■□□□□ 0.46
SMG6-212ENST00000573153 JAM2P57087 298 aa17.92■□□□□ 0.46
SMG6-212ENST00000573153 SNX16P57768 344 aa17.92■□□□□ 0.46
SMG6-212ENST00000573153 STARD3Q14849 445 aa17.92■□□□□ 0.46
SMG6-212ENST00000573153 CXorf57Q6NSI4 855 aaKnown RBP17.92■□□□□ 0.46
SMG6-212ENST00000573153 MFN1Q8IWA4 741 aa17.92■□□□□ 0.46
SMG6-212ENST00000573153 OR2T3Q8NH03 318 aa17.92■□□□□ 0.46
SMG6-212ENST00000573153 BTN2A3PQ96KV6 586 aa17.92■□□□□ 0.46
SMG6-212ENST00000573153 HSPA12BQ96MM6 686 aa17.92■□□□□ 0.46
SMG6-212ENST00000573153 NPY6RQ99463 290 aa17.92■□□□□ 0.46
SMG6-212ENST00000573153 FANCLQ9NW38 375 aa17.92■□□□□ 0.46
SMG6-212ENST00000573153 STIM2Q9P246 746 aa17.92■□□□□ 0.46
SMG6-212ENST00000573153 LIMA1Q9UHB6 759 aaKnown RBP17.92■□□□□ 0.46
SMG6-212ENST00000573153 NOCTQ9UK39 431 aaKnown RBP17.92■□□□□ 0.46
SMG6-212ENST00000573153 SLCO1B1Q9Y6L6 691 aa17.92■□□□□ 0.46
SMG6-212ENST00000573153 NUMA1Q14980 2115 aa17.92■□□□□ 0.46
SMG6-212ENST00000573153 PES1O00541 588 aaKnown RBP17.91■□□□□ 0.46
SMG6-212ENST00000573153 CAPN9O14815 690 aa17.91■□□□□ 0.46
SMG6-212ENST00000573153 MAP3K13O43283 966 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms