RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 IRF2BPLQ9H1B7 796 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 CD93Q9NPY3 652 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 TMPRSS4Q9NRS4 437 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 TAS2R14Q9NYV8 317 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 EBF1Q9UH73 591 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 STRIP2Q9ULQ0 834 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 SMG5Q9UPR3 1016 aaKnown RBP9.02□□□□□ -0.97
SMG6-210ENST00000572205 ZNF510Q9Y2H8 683 aa9.02□□□□□ -0.97
SMG6-210ENST00000572205 ADAMTS9Q9P2N4 1935 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 SDK1Q7Z5N4 2213 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 PI4KAP42356 2102 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 LRRC53A6NM62 1247 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.01□□□□□ -0.97
SMG6-210ENST00000572205 PES1O00541 588 aaKnown RBP9.01□□□□□ -0.97
SMG6-210ENST00000572205 AP5Z1O43299 807 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 ATP9BO43861 1147 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 GFRA3O60609 400 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 ENDOD1O94919 500 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 KLF8O95600 359 aaPredicted RBP9.01□□□□□ -0.97
SMG6-210ENST00000572205 APODP05090 189 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 CD70P32970 193 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 GGCXP38435 758 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 MATKP42679 507 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 DGKGP49619 791 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 CXCR3P49682 368 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 BPIFB4P59827 614 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 RPS24P62847 133 aaKnown RBP9.01□□□□□ -0.97
SMG6-210ENST00000572205 FANCCQ00597 558 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 AMPD2Q01433 879 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 ZNF252P-AS1Q0IIN9 211 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 NFKBIBQ15653 356 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 FUT11Q495W5 492 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 ZC3H12AQ5D1E8 599 aaKnown RBP9.01□□□□□ -0.97
SMG6-210ENST00000572205 FSCBQ5H9T9 825 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 MS4A13Q5J8X5 152 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 C10orf76Q5T2E6 689 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 GRAMD4Q6IC98 578 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 CXorf57Q6NSI4 855 aaKnown RBP9.01□□□□□ -0.97
SMG6-210ENST00000572205 MMS22LQ6ZRQ5 1243 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 LONP2Q86WA8 852 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 PHF13Q86YI8 300 aaPredicted RBP9.01□□□□□ -0.97
SMG6-210ENST00000572205 ZDHHC17Q8IUH5 632 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 CCDC33Q8N5R6 958 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 TXNDC5Q8NBS9 432 aaKnown RBP9.01□□□□□ -0.97
SMG6-210ENST00000572205 TMEM35BQ8NCS4 154 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 NEK11Q8NG66 645 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 SLC30A5Q8TAD4 765 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 RNF139Q8WU17 664 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 TMEM131Q92545 1883 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 ACDQ96AP0 544 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 MRGPRX3Q96LB0 322 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 IRX2Q9BZI1 471 aaPredicted RBP9.01□□□□□ -0.97
SMG6-210ENST00000572205 NAT10Q9H0A0 1025 aaKnown RBP9.01□□□□□ -0.97
SMG6-210ENST00000572205 PARD6AQ9NPB6 346 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 ARHGEF38Q9NXL2 777 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 WDR35Q9P2L0 1181 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 DEC1Q9P2X7 70 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 ZMIZ1Q9ULJ6 1067 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 MYO6Q9UM54 1294 aa9.01□□□□□ -0.97
SMG6-210ENST00000572205 PTPRZ1P23471 2315 aaPredicted RBP9□□□□□ -0.97
SMG6-210ENST00000572205 DOCK9Q9BZ29 2069 aa9□□□□□ -0.97
SMG6-210ENST00000572205 ANKRD36A6QL64 1941 aa9□□□□□ -0.97
SMG6-210ENST00000572205 C2CD4BA6NLJ0 364 aa9□□□□□ -0.97
SMG6-210ENST00000572205 TSPAN3O60637 253 aa9□□□□□ -0.97
SMG6-210ENST00000572205 ADCY5O95622 1261 aa9□□□□□ -0.97
SMG6-210ENST00000572205 GYPCP04921 128 aa9□□□□□ -0.97
SMG6-210ENST00000572205 GABRG2P18507 467 aa9□□□□□ -0.97
SMG6-210ENST00000572205 BCKDHBP21953 392 aa9□□□□□ -0.97
SMG6-210ENST00000572205 PRKCHP24723 683 aa9□□□□□ -0.97
SMG6-210ENST00000572205 NOS2P35228 1153 aa9□□□□□ -0.97
SMG6-210ENST00000572205 KRT9P35527 623 aa9□□□□□ -0.97
SMG6-210ENST00000572205 CHKAP35790 457 aa9□□□□□ -0.97
SMG6-210ENST00000572205 STAT1P42224 750 aa9□□□□□ -0.97
SMG6-210ENST00000572205 IL12RB1P42701 662 aa9□□□□□ -0.97
SMG6-210ENST00000572205 COPAP53621 1224 aa9□□□□□ -0.97
SMG6-210ENST00000572205 OGDHQ02218 1023 aa9□□□□□ -0.97
SMG6-210ENST00000572205 PPP2R5DQ14738 602 aa9□□□□□ -0.97
SMG6-210ENST00000572205 ARID5BQ14865 1188 aa9□□□□□ -0.97
SMG6-210ENST00000572205 HSF5Q4G112 596 aaPredicted RBP9□□□□□ -0.97
SMG6-210ENST00000572205 DCAF6Q58WW2 860 aa9□□□□□ -0.97
SMG6-210ENST00000572205 EFHC1Q5JVL4 640 aa9□□□□□ -0.97
SMG6-210ENST00000572205 MPP7Q5T2T1 576 aa9□□□□□ -0.97
SMG6-210ENST00000572205 SH3PXD2AQ5TCZ1 1133 aa9□□□□□ -0.97
SMG6-210ENST00000572205 MANEALQ5VSG8 457 aa9□□□□□ -0.97
SMG6-210ENST00000572205 OR6B2Q6IFH4 312 aa9□□□□□ -0.97
SMG6-210ENST00000572205 CYP4V2Q6ZWL3 525 aaPredicted RBP9□□□□□ -0.97
SMG6-210ENST00000572205 ZNF571Q7Z3V5 609 aaPredicted RBP9□□□□□ -0.97
SMG6-210ENST00000572205 ANKS1BQ7Z6G8 1248 aa9□□□□□ -0.97
SMG6-210ENST00000572205 C14orf80Q86SX3 495 aa9□□□□□ -0.97
SMG6-210ENST00000572205 CIR1Q86X95 450 aaPredicted RBP9□□□□□ -0.97
SMG6-210ENST00000572205 DNAAF5Q86Y56 855 aa9□□□□□ -0.97
SMG6-210ENST00000572205 CAMKK1Q8N5S9 505 aa9□□□□□ -0.97
SMG6-210ENST00000572205 EMC1Q8N766 993 aa9□□□□□ -0.97
SMG6-210ENST00000572205 FRMD1Q8N878 549 aa9□□□□□ -0.97
SMG6-210ENST00000572205 ZNF513Q8N8E2 541 aaPredicted RBP9□□□□□ -0.97
SMG6-210ENST00000572205 SORCS1Q8WY21 1168 aa9□□□□□ -0.97
SMG6-210ENST00000572205 CENPIQ92674 756 aaPredicted RBP9□□□□□ -0.97
SMG6-210ENST00000572205 NKD2Q969F2 451 aaPredicted RBP9□□□□□ -0.97
SMG6-210ENST00000572205 IGSF8Q969P0 613 aa9□□□□□ -0.97
SMG6-210ENST00000572205 VOPP1Q96AW1 172 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms