RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-213	ENST00000571643	RNASE12	Q5GAN4	147 aa	Known RBP	4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	CACHD1	Q5VU97	1274 aa		4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	ANO7	Q6IWH7	933 aa		4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	CCDC70	Q6NSX1	233 aa		4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	MZT2A	Q6P582	158 aa		4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	MRPL10	Q7Z7H8	261 aa	Known RBP	4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	KRT73	Q86Y46	540 aa		4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	TMEM171	Q8WVE6	324 aa		4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	HMCES	Q96FZ2	354 aa		4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	ZNF521	Q96K83	1311 aa		4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	NEUROD6	Q96NK8	337 aa		4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	PLEKHF1	Q96S99	279 aa		4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	C22orf23	Q9BZE7	217 aa		4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	LRRC27	Q9C0I9	530 aa		4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	VPS16	Q9H269	839 aa		4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	FAM83D	Q9H4H8	585 aa		4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	ATP6V0A4	Q9HBG4	840 aa		4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	GBA2	Q9HCG7	927 aa	Predicted RBP	4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	TPCN1	Q9ULQ1	816 aa		4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	NOL7	Q9UMY1	257 aa	Known RBP	4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	MAPK8IP3	Q9UPT6	1336 aa		4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	TOGARAM1	Q9Y4F4	1720 aa		4.08	□□□□□ -1.76
CDC27-213	ENST00000571643	SIPA1L3	O60292	1781 aa	Predicted RBP	4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	CASZ1	Q86V15	1759 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	SOS1	Q07889	1333 aa	Predicted RBP	4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	PYCARD-AS1	I3L0S3	204 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	CD3EAP	O15446	510 aa	Known RBP	4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	RASSF9	O75901	435 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	RASAL1	O95294	804 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	STARD3NL	O95772	234 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	TOP3B	O95985	862 aa	Known RBP	4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	MT-CO3	P00414	261 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	A1BG	P04217	495 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	MYL3	P08590	195 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	FPR3	P25089	353 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	IL1R2	P27930	398 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	ARHGEF7	Q14155	803 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	POLD3	Q15054	466 aa	Predicted RBP	4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	TAF7	Q15545	349 aa	Predicted RBP	4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	ST3GAL2	Q16842	350 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	GRAMD1B	Q3KR37	738 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	TTLL5	Q6EMB2	1281 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	SLC2A7	Q6PXP3	512 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	VSTM1	Q6UX27	236 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	DPY19L3	Q6ZPD9	716 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	GET4	Q7L5D6	327 aa	Predicted RBP	4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	SRGAP1	Q7Z6B7	1085 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	YAF2	Q8IY57	180 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	SMAP1	Q8IYB5	467 aa	Predicted RBP	4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	TCEAL8	Q8IYN2	117 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	TTC5	Q8N0Z6	440 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	MYO1H	Q8N1T3	1032 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	CCDC89	Q8N998	374 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	C9orf106	Q8NAJ2	232 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	IL17RE	Q8NFR9	667 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	MYRIP	Q8NFW9	859 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	DNAJB14	Q8TBM8	379 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	IPO4	Q8TEX9	1081 aa	Known RBP	4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	MAML1	Q92585	1016 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	SH2D3A	Q9BRG2	576 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	PDGFC	Q9NRA1	345 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	DNMT3B	Q9UBC3	853 aa	Known RBP	4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	ASAP1	Q9ULH1	1129 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	NAP1L2	Q9ULW6	460 aa	Predicted RBP	4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	L1RE1	Q9UN81	338 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	UBR2	Q8IWV8	1755 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	C4B	P0C0L5	1744 aa		4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	COL5A3	P25940	1745 aa	Predicted RBP	4.07	□□□□□ -1.76
CDC27-213	ENST00000571643	DLG5	Q8TDM6	1919 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	TTC36	A6NLP5	189 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	PRPF3	O43395	683 aa	Known RBP	4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	RRP9	O43818	475 aa	Known RBP	4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	MGEA5	O60502	916 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	PIAS2	O75928	621 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	FGB	P02675	491 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	RPL17	P18621	184 aa	Known RBP	4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	ACVR2A	P27037	513 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	UQCRC1	P31930	480 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	TMPO	P42166	694 aa	Known RBP	4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	ALDH5A1	P51649	535 aa	Predicted RBP	4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	SUMO3	P55854	103 aa	Predicted RBP	4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	TIRAP	P58753	221 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	GHRHR	Q02643	423 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	LARS2	Q15031	903 aa	Known RBP	4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	CNGA2	Q16280	664 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	LY6K	Q17RY6	165 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	ALF	Q53S48	1182 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	C10orf62	Q5T681	223 aa	Predicted RBP	4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	ZNF790	Q6PG37	636 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	TMEM65	Q6PI78	240 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	APOA5	Q6Q788	366 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	MICU3	Q86XE3	530 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	CREBRF	Q8IUR6	639 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	RAVER1	Q8IY67	606 aa	Known RBP	4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	MAGEB6	Q8N7X4	407 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	OR56A3	Q8NH54	315 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	LRTOMT	Q8WZ04	291 aa		4.06	□□□□□ -1.76

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