RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 DHX40Q8IX18 779 aaKnown RBP12.57□□□□□ -0.4
CAPN3-220ENST00000569827 TMA16Q96EY4 203 aaKnown RBP12.57□□□□□ -0.4
CAPN3-220ENST00000569827 IPO9Q96P70 1041 aaKnown RBP12.57□□□□□ -0.4
CAPN3-220ENST00000569827 CDC6Q99741 560 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 GOLPH3LQ9H4A5 285 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 EBF2Q9HAK2 575 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 KIAA1522Q9P206 1035 aaPredicted RBP12.57□□□□□ -0.4
CAPN3-220ENST00000569827 PLA2G4CQ9UP65 541 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 HPSEQ9Y251 543 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 PCDHGB2Q9Y5G2 931 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 ATMQ13315 3056 aa12.57□□□□□ -0.4
CAPN3-220ENST00000569827 A0A1W2PP55 124 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 WNT9AO14904 365 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 XPO1O14980 1071 aaKnown RBP12.56□□□□□ -0.4
CAPN3-220ENST00000569827 SIN3BO75182 1162 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 WNT1P04628 370 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 CMA1P23946 247 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 ITPKBP27987 946 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 CTSOP43234 321 aaPredicted RBP12.56□□□□□ -0.4
CAPN3-220ENST00000569827 CTSKP43235 329 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 GRK6P43250 576 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 BCAT1P54687 386 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 BST2Q10589 180 aaKnown RBP12.56□□□□□ -0.4
CAPN3-220ENST00000569827 NFIL3Q16649 462 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 SGO2Q562F6 1265 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 FAM133BQ5BKY9 247 aaKnown RBP12.56□□□□□ -0.4
CAPN3-220ENST00000569827 NADSYN1Q6IA69 706 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 HSCBQ8IWL3 235 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 AHI1Q8N157 1196 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 SIX6OS1Q8N1H7 587 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 PIP4K2CQ8TBX8 421 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 WFIKKN2Q8TEU8 576 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 IGSF8Q969P0 613 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 MYO19Q96H55 970 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 PRICKLE1Q96MT3 831 aaPredicted RBP12.56□□□□□ -0.4
CAPN3-220ENST00000569827 FTSJ1Q9UET6 329 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 CFAP45Q9UL16 551 aa12.56□□□□□ -0.4
CAPN3-220ENST00000569827 HBS1LQ9Y450 684 aaKnown RBP12.56□□□□□ -0.4
CAPN3-220ENST00000569827 FLNBO75369 2602 aaKnown RBP12.55□□□□□ -0.4
CAPN3-220ENST00000569827 MID1O15344 667 aa12.55□□□□□ -0.4
CAPN3-220ENST00000569827 TNFSF14O43557 240 aa12.55□□□□□ -0.4
CAPN3-220ENST00000569827 TIMM44O43615 452 aa12.55□□□□□ -0.4
CAPN3-220ENST00000569827 DLDP09622 509 aaKnown RBP12.55□□□□□ -0.4
CAPN3-220ENST00000569827 POLR2EP19388 210 aaKnown RBP12.55□□□□□ -0.4
CAPN3-220ENST00000569827 CD27P26842 260 aa12.55□□□□□ -0.4
CAPN3-220ENST00000569827 CSKP41240 450 aa12.55□□□□□ -0.4
CAPN3-220ENST00000569827 SLC8A3P57103 927 aa12.55□□□□□ -0.4
CAPN3-220ENST00000569827 DAOAP59103 153 aa12.55□□□□□ -0.4
CAPN3-220ENST00000569827 RPS24P62847 133 aaKnown RBP12.55□□□□□ -0.4
CAPN3-220ENST00000569827 CUL2Q13617 745 aa12.55□□□□□ -0.4
CAPN3-220ENST00000569827 SUZ12Q15022 739 aaKnown RBP12.55□□□□□ -0.4
CAPN3-220ENST00000569827 TTC31Q49AM3 519 aaPredicted RBP12.55□□□□□ -0.4
CAPN3-220ENST00000569827 ADGRF1Q5T601 910 aa12.55□□□□□ -0.4
CAPN3-220ENST00000569827 ZNF776Q68DI1 518 aaPredicted RBP12.55□□□□□ -0.4
CAPN3-220ENST00000569827 KIAA0895LQ68EN5 471 aa12.55□□□□□ -0.4
CAPN3-220ENST00000569827 NCEH1Q6PIU2 408 aa12.55□□□□□ -0.4
CAPN3-220ENST00000569827 KIAA0907Q7Z7F0 614 aaPredicted RBP12.55□□□□□ -0.4
CAPN3-220ENST00000569827 CFAP52Q8N1V2 620 aa12.55□□□□□ -0.4
CAPN3-220ENST00000569827 GUF1Q8N442 669 aaKnown RBP12.55□□□□□ -0.4
CAPN3-220ENST00000569827 CARNMT1Q8N4J0 409 aa12.55□□□□□ -0.4
CAPN3-220ENST00000569827 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.55□□□□□ -0.4
CAPN3-220ENST00000569827 TFAP2BQ92481 460 aa12.55□□□□□ -0.4
CAPN3-220ENST00000569827 CCDC47Q96A33 483 aaKnown RBP12.55□□□□□ -0.4
CAPN3-220ENST00000569827 SPATA32Q96LK8 384 aa12.55□□□□□ -0.4
CAPN3-220ENST00000569827 DNAI2Q9GZS0 605 aa12.55□□□□□ -0.4
CAPN3-220ENST00000569827 PABPC3Q9H361 631 aaKnown RBP12.55□□□□□ -0.4
CAPN3-220ENST00000569827 CAAP1Q9H8G2 361 aa12.55□□□□□ -0.4
CAPN3-220ENST00000569827 OLA1Q9NTK5 396 aaKnown RBP12.55□□□□□ -0.4
CAPN3-220ENST00000569827 FBXL12Q9NXK8 326 aa12.55□□□□□ -0.4
CAPN3-220ENST00000569827 HESX1Q9UBX0 185 aa12.55□□□□□ -0.4
CAPN3-220ENST00000569827 INTS6Q9UL03 887 aaKnown RBP12.55□□□□□ -0.4
CAPN3-220ENST00000569827 TRPM6Q9BX84 2022 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 TRIM49BA6NDI0 452 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 TTC34A8MYJ7 566 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 O00370 1275 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 MOCS2O96007 188 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-220ENST00000569827 EPB41P11171 864 aaKnown RBP12.54□□□□□ -0.4
CAPN3-220ENST00000569827 BRD2P25440 801 aaKnown RBP12.54□□□□□ -0.4
CAPN3-220ENST00000569827 RPL13P26373 211 aaKnown RBP12.54□□□□□ -0.4
CAPN3-220ENST00000569827 GTF2H1P32780 548 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 PSMD8P48556 350 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 C21orf59P57076 290 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 KCNJ12Q14500 433 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 SHBQ15464 509 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 FSCBQ5H9T9 825 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 PIK3R6Q5UE93 754 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 PMF1Q6P1K2 205 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 KRBA2Q6ZNG9 492 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 MMAAQ8IVH4 418 aaKnown RBP12.54□□□□□ -0.4
CAPN3-220ENST00000569827 MFN1Q8IWA4 741 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 GALNT15Q8N3T1 639 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 ADAM32Q8TC27 787 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 ERCC4Q92889 916 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-220ENST00000569827 KAT5Q92993 513 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 SNX21Q969T3 373 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 ZSWIM1Q9BR11 485 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 UBXN6Q9BZV1 441 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 NUCKS1Q9H1E3 243 aaKnown RBP12.54□□□□□ -0.4
CAPN3-220ENST00000569827 PCED1AQ9H1Q7 454 aa12.54□□□□□ -0.4
CAPN3-220ENST00000569827 RSPH9Q9H1X1 276 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms