RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 I6L893 689 aaPredicted RBP8.11□□□□□ -1.11
CDH3-209ENST00000569080 AP5Z1O43299 807 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 TBL1XO60907 577 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 HSF2BPO75031 334 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 DAB1O75553 588 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 LUC7L3O95232 432 aaKnown RBP8.11□□□□□ -1.11
CDH3-209ENST00000569080 MOCS2O96007 188 aaPredicted RBP8.11□□□□□ -1.11
CDH3-209ENST00000569080 DLDP09622 509 aaKnown RBP8.11□□□□□ -1.11
CDH3-209ENST00000569080 HLA-EP13747 358 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 KLK7P49862 253 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 IRAK1P51617 712 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 IRX4P78413 519 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 RPL6Q02878 288 aaKnown RBP8.11□□□□□ -1.11
CDH3-209ENST00000569080 PTK2Q05397 1052 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 LMAN2Q12907 356 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 BYSLQ13895 437 aaKnown RBP8.11□□□□□ -1.11
CDH3-209ENST00000569080 STARD3Q14849 445 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 NCAPHQ15003 741 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 KRT31Q15323 416 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 DCAF6Q58WW2 860 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 ZC3H12AQ5D1E8 599 aaKnown RBP8.11□□□□□ -1.11
CDH3-209ENST00000569080 FSCBQ5H9T9 825 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 PPM1JQ5JR12 505 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 ARTNQ5T4W7 220 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 MBLAC2Q68D91 279 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 SDE2Q6IQ49 451 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 TRNP1Q6NT89 227 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 KIAA1324Q6UXG2 1013 aaKnown RBP8.11□□□□□ -1.11
CDH3-209ENST00000569080 SERPINA13PQ6UXR4 307 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 SLC36A4Q6YBV0 504 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 MMS22LQ6ZRQ5 1243 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 CHST9Q7L1S5 443 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 APTXQ7Z2E3 356 aaKnown RBP8.11□□□□□ -1.11
CDH3-209ENST00000569080 NOP9Q86U38 636 aaKnown RBP8.11□□□□□ -1.11
CDH3-209ENST00000569080 SYT12Q8IV01 421 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 MFN1Q8IWA4 741 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 DEFB106AQ8N104 65 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 PGBD3Q8N328 593 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 ZNF366Q8N895 744 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 ZNF397Q8NF99 534 aaPredicted RBP8.11□□□□□ -1.11
CDH3-209ENST00000569080 FIBINQ8TAL6 211 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 EPS8L1Q8TE68 723 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 UCMAQ8WVF2 138 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 BTN2A3PQ96KV6 586 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 MRGPRX3Q96LB0 322 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 GBP4Q96PP9 640 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 LSM14BQ9BX40 385 aaKnown RBP8.11□□□□□ -1.11
CDH3-209ENST00000569080 CAPN10Q9HC96 672 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 ANLNQ9NQW6 1124 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 NOCTQ9UK39 431 aaKnown RBP8.11□□□□□ -1.11
CDH3-209ENST00000569080 ASCC3Q8N3C0 2202 aaKnown RBP8.11□□□□□ -1.11
CDH3-209ENST00000569080 ADAMTS9Q9P2N4 1935 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 ACACBO00763 2458 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 EPG5Q9HCE0 2579 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 C10orf142B7Z368 130 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 CAPN9O14815 690 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 KHNYNO15037 678 aaKnown RBP8.1□□□□□ -1.11
CDH3-209ENST00000569080 TIMM44O43615 452 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 GRAP2O75791 330 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 APOEP02649 317 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 EPHX1P07099 455 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 ADRB1P08588 477 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 ZNF18P17022 549 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 TFE3P19532 575 aaPredicted RBP8.1□□□□□ -1.11
CDH3-209ENST00000569080 TACR2P21452 398 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 CD6P30203 668 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 SCNN1AP37088 669 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 CSKP41240 450 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 GABRB2P47870 512 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 TPMTP51580 245 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 JAM2P57087 298 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 ZNF33AQ06730 810 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 RAPGEF1Q13905 1077 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 ARID5BQ14865 1188 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 TRIM61Q5EBN2 209 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 RAP1GAP2Q684P5 730 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 CXorf57Q6NSI4 855 aaKnown RBP8.1□□□□□ -1.11
CDH3-209ENST00000569080 SLC23A3Q6PIS1 610 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 BNIPLQ7Z465 357 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 CHSY1Q86X52 802 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 CIR1Q86X95 450 aaPredicted RBP8.1□□□□□ -1.11
CDH3-209ENST00000569080 CACUL1Q86Y37 369 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 TMPRSS6Q8IU80 811 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 CFAP52Q8N1V2 620 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 ZNF557Q8N988 423 aaPredicted RBP8.1□□□□□ -1.11
CDH3-209ENST00000569080 OR2T3Q8NH03 318 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 PIGKQ92643 395 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 NT5C3BQ969T7 300 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 TTC17Q96AE7 1141 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 TOE1Q96GM8 510 aaKnown RBP8.1□□□□□ -1.11
CDH3-209ENST00000569080 ZNF419Q96HQ0 510 aaPredicted RBP8.1□□□□□ -1.11
CDH3-209ENST00000569080 HSPA12BQ96MM6 686 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 NPY6RQ99463 290 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 FAM204AQ9H8W3 233 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 PRDM16Q9HAZ2 1276 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 FSCN3Q9NQT6 498 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 ITM2CQ9NQX7 267 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 DDIT4Q9NX09 232 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 WSB2Q9NYS7 404 aaPredicted RBP8.1□□□□□ -1.11
CDH3-209ENST00000569080 SIK3Q9Y2K2 1263 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms