RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 MKI67P46013 3256 aaKnown RBP23.97■■□□□ 1.43
LINC00543-201ENST00000567234 DCLK1O15075 740 aa23.97■■□□□ 1.43
LINC00543-201ENST00000567234 GLUD2P49448 558 aa23.97■■□□□ 1.43
LINC00543-201ENST00000567234 GEMIN4P57678 1058 aaKnown RBP23.97■■□□□ 1.43
LINC00543-201ENST00000567234 PRKD1Q15139 912 aaPredicted RBP23.97■■□□□ 1.43
LINC00543-201ENST00000567234 VSTM1Q6UX27 236 aa23.97■■□□□ 1.43
LINC00543-201ENST00000567234 CCDC110Q8TBZ0 833 aa23.97■■□□□ 1.43
LINC00543-201ENST00000567234 LRRC39Q96DD0 335 aa23.97■■□□□ 1.43
LINC00543-201ENST00000567234 TBK1Q9UHD2 729 aa23.97■■□□□ 1.43
LINC00543-201ENST00000567234 TMEM120BA0PK00 339 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 CREB3O43889 395 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 MFSD11O43934 449 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 B4GALT3O60512 393 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 BRAFP15056 766 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 ACCSLQ4AC99 568 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 FAM126BQ8IXS8 530 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 FAM193BQ96PV7 902 aaPredicted RBP23.96■■□□□ 1.43
LINC00543-201ENST00000567234 PSMC3IPQ9P2W1 217 aaPredicted RBP23.96■■□□□ 1.43
LINC00543-201ENST00000567234 A0A0A0MRY4 1105 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 POC1B-GALNT4F8VUJ3 575 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 F8W810 466 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 SYN3O14994 580 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 STK10O94804 968 aaKnown RBP23.96■■□□□ 1.43
LINC00543-201ENST00000567234 SUN1O94901 812 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 SSTR1P30872 391 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 FDFT1P37268 417 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 TMED2Q15363 201 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 PKN2Q16513 984 aaKnown RBP23.96■■□□□ 1.43
LINC00543-201ENST00000567234 NAIF1Q69YI7 327 aaPredicted RBP23.96■■□□□ 1.43
LINC00543-201ENST00000567234 TRABD2AQ86V40 505 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 DCP1BQ8IZD4 617 aaKnown RBP23.96■■□□□ 1.43
LINC00543-201ENST00000567234 SPDL1Q96EA4 605 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 SPATA13Q96N96 652 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 DHRS4Q9BTZ2 278 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 ZCWPW1Q9H0M4 648 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 WDCPQ9H6R7 721 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 TMPRSS4Q9NRS4 437 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 MFHAS1Q9Y4C4 1052 aa23.96■■□□□ 1.43
LINC00543-201ENST00000567234 RASA4BC9J798 803 aa23.95■■□□□ 1.42
LINC00543-201ENST00000567234 RASA4O43374 803 aa23.95■■□□□ 1.42
LINC00543-201ENST00000567234 SNX3O60493 162 aa23.95■■□□□ 1.42
LINC00543-201ENST00000567234 CYP2C18P33260 490 aa23.95■■□□□ 1.42
LINC00543-201ENST00000567234 ELK3P41970 407 aa23.95■■□□□ 1.42
LINC00543-201ENST00000567234 SLC18A1P54219 525 aa23.95■■□□□ 1.42
LINC00543-201ENST00000567234 CDK16Q00536 496 aa23.95■■□□□ 1.42
LINC00543-201ENST00000567234 CCDC15Q0P6D6 951 aa23.95■■□□□ 1.42
LINC00543-201ENST00000567234 SEMA5AQ13591 1074 aa23.95■■□□□ 1.42
LINC00543-201ENST00000567234 PLEKHG4Q58EX7 1191 aa23.95■■□□□ 1.42
LINC00543-201ENST00000567234 ARHGEF18Q6ZSZ5 1173 aa23.95■■□□□ 1.42
LINC00543-201ENST00000567234 ADAM32Q8TC27 787 aa23.95■■□□□ 1.42
LINC00543-201ENST00000567234 FUBP3Q96I24 572 aaKnown RBP eCLIP23.95■■□□□ 1.42
LINC00543-201ENST00000567234 ARHGEF3Q9NR81 526 aa23.95■■□□□ 1.42
LINC00543-201ENST00000567234 USP15Q9Y4E8 981 aaPredicted RBP23.95■■□□□ 1.42
LINC00543-201ENST00000567234 PITPNM1O00562 1244 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 TNFRSF10BO14763 440 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 NCAM2O15394 837 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 AHCYL1O43865 530 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 IGLV3-25P01717 112 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 APRTP07741 180 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 RPSAP08865 295 aaKnown RBP23.94■■□□□ 1.42
LINC00543-201ENST00000567234 GSTA2P09210 222 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 OR1G1P47890 313 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 TPI1P60174 286 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 BNIP1Q12981 228 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 RBBP5Q15291 538 aaKnown RBP23.94■■□□□ 1.42
LINC00543-201ENST00000567234 NFE2Q16621 373 aaPredicted RBP23.94■■□□□ 1.42
LINC00543-201ENST00000567234 AP1ARQ63HQ0 302 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 SRRM1Q8IYB3 904 aaKnown RBP23.94■■□□□ 1.42
LINC00543-201ENST00000567234 FBF1Q8TES7 1133 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 EDEM1Q92611 657 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 BRD8Q9H0E9 1235 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 ABCC13Q9NSE7 274 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 ENPP3O14638 875 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 PQBP1O60828 265 aaKnown RBP23.94■■□□□ 1.42
LINC00543-201ENST00000567234 OPHN1O60890 802 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 METTL18O95568 372 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 VAV1P15498 845 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 CREB1P16220 341 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 MAGEA3P43357 314 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 CCNHP51946 323 aaPredicted RBP23.94■■□□□ 1.42
LINC00543-201ENST00000567234 NCALDP61601 193 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 EIF4EBP2Q13542 120 aaPredicted RBP23.94■■□□□ 1.42
LINC00543-201ENST00000567234 ANKRD20A2Q5SQ80 823 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 ANKRD20A1Q5TYW2 823 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 ANKRD20A3Q5VUR7 823 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 ADGRD1Q6QNK2 874 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 CAPN12Q6ZSI9 719 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 AGAP11Q8TF27 550 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 CYTH2Q99418 400 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 ANLNQ9NQW6 1124 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 RPL26L1Q9UNX3 145 aaKnown RBP23.94■■□□□ 1.42
LINC00543-201ENST00000567234 CHMP2BQ9UQN3 213 aa23.94■■□□□ 1.42
LINC00543-201ENST00000567234 MYO18AQ92614 2054 aaKnown RBP23.93■■□□□ 1.42
LINC00543-201ENST00000567234 A6NHS1 94 aa23.93■■□□□ 1.42
LINC00543-201ENST00000567234 NBNO60934 754 aa23.93■■□□□ 1.42
LINC00543-201ENST00000567234 ATP5HO75947 161 aa23.93■■□□□ 1.42
LINC00543-201ENST00000567234 FESP07332 822 aa23.93■■□□□ 1.42
LINC00543-201ENST00000567234 ERCC2P18074 760 aa23.93■■□□□ 1.42
LINC00543-201ENST00000567234 CAND1Q86VP6 1230 aaKnown RBP23.93■■□□□ 1.42
LINC00543-201ENST00000567234 LRRC34Q8IZ02 419 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms