RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 TMEM110Q86TL2 294 aa19.02■□□□□ 0.64
USB1-213ENST00000566292 CREBRFQ8IUR6 639 aa19.02■□□□□ 0.64
USB1-213ENST00000566292 CADM4Q8NFZ8 388 aa19.02■□□□□ 0.64
USB1-213ENST00000566292 DNASE2BQ8WZ79 361 aa19.02■□□□□ 0.64
USB1-213ENST00000566292 NUCKS1Q9H1E3 243 aaKnown RBP19.02■□□□□ 0.64
USB1-213ENST00000566292 TJP2Q9UDY2 1190 aa19.02■□□□□ 0.64
USB1-213ENST00000566292 PLA2G4CQ9UP65 541 aa19.02■□□□□ 0.64
USB1-213ENST00000566292 WASF3Q9UPY6 502 aa19.02■□□□□ 0.64
USB1-213ENST00000566292 MEI4A8MW99 385 aa19.01■□□□□ 0.63
USB1-213ENST00000566292 UPK3BL1B0FP48 263 aa19.01■□□□□ 0.63
USB1-213ENST00000566292 UPK3BL2E5RIL1 263 aa19.01■□□□□ 0.63
USB1-213ENST00000566292 OPHN1O60890 802 aa19.01■□□□□ 0.63
USB1-213ENST00000566292 C7P10643 843 aa19.01■□□□□ 0.63
USB1-213ENST00000566292 ACADMP11310 421 aa19.01■□□□□ 0.63
USB1-213ENST00000566292 RPS24P62847 133 aaKnown RBP19.01■□□□□ 0.63
USB1-213ENST00000566292 FOXC1Q12948 553 aa19.01■□□□□ 0.63
USB1-213ENST00000566292 ST3GAL2Q16842 350 aa19.01■□□□□ 0.63
USB1-213ENST00000566292 PLEKHG6Q3KR16 790 aa19.01■□□□□ 0.63
USB1-213ENST00000566292 GBP6Q6ZN66 633 aa19.01■□□□□ 0.63
USB1-213ENST00000566292 BEND5Q7L4P6 421 aa19.01■□□□□ 0.63
USB1-213ENST00000566292 MFN1Q8IWA4 741 aa19.01■□□□□ 0.63
USB1-213ENST00000566292 HDDC3Q8N4P3 179 aa19.01■□□□□ 0.63
USB1-213ENST00000566292 HJURPQ8NCD3 748 aaPredicted RBP19.01■□□□□ 0.63
USB1-213ENST00000566292 FIBINQ8TAL6 211 aa19.01■□□□□ 0.63
USB1-213ENST00000566292 NUP58Q9BVL2 599 aa19.01■□□□□ 0.63
USB1-213ENST00000566292 DNAAF2Q9NVR5 837 aaKnown RBP19.01■□□□□ 0.63
USB1-213ENST00000566292 APEX2Q9UBZ4 518 aa19.01■□□□□ 0.63
USB1-213ENST00000566292 SUSD2Q9UGT4 822 aa19.01■□□□□ 0.63
USB1-213ENST00000566292 XPO7Q9UIA9 1087 aaKnown RBP19.01■□□□□ 0.63
USB1-213ENST00000566292 INTS6Q9UL03 887 aaKnown RBP19.01■□□□□ 0.63
USB1-213ENST00000566292 NFE2L3Q9Y4A8 694 aa19.01■□□□□ 0.63
USB1-213ENST00000566292 METTL12A8MUP2 240 aa19■□□□□ 0.63
USB1-213ENST00000566292 KRT37O76014 449 aa19■□□□□ 0.63
USB1-213ENST00000566292 TOP3BO95985 862 aaKnown RBP19■□□□□ 0.63
USB1-213ENST00000566292 MOCS2O96007 188 aaPredicted RBP19■□□□□ 0.63
USB1-213ENST00000566292 SYPP08247 313 aa19■□□□□ 0.63
USB1-213ENST00000566292 POLR2EP19388 210 aaKnown RBP19■□□□□ 0.63
USB1-213ENST00000566292 PITX1P78337 314 aaPredicted RBP19■□□□□ 0.63
USB1-213ENST00000566292 PDCLQ13371 301 aa19■□□□□ 0.63
USB1-213ENST00000566292 MS4A13Q5J8X5 152 aa19■□□□□ 0.63
USB1-213ENST00000566292 DCAF12L1Q5VU92 463 aa19■□□□□ 0.63
USB1-213ENST00000566292 FAM124AQ86V42 546 aa19■□□□□ 0.63
USB1-213ENST00000566292 WDTC1Q8N5D0 677 aa19■□□□□ 0.63
USB1-213ENST00000566292 SHC3Q92529 594 aa19■□□□□ 0.63
USB1-213ENST00000566292 MYO19Q96H55 970 aa19■□□□□ 0.63
USB1-213ENST00000566292 LHX5Q9H2C1 402 aa19■□□□□ 0.63
USB1-213ENST00000566292 SLC32A1Q9H598 525 aa19■□□□□ 0.63
USB1-213ENST00000566292 POPDC2Q9HBU9 364 aa19■□□□□ 0.63
USB1-213ENST00000566292 PRSS16Q9NQE7 514 aa19■□□□□ 0.63
USB1-213ENST00000566292 AJAP1Q9UKB5 411 aaPredicted RBP19■□□□□ 0.63
USB1-213ENST00000566292 GTPBP10A4D1E9 387 aaKnown RBP18.99■□□□□ 0.63
USB1-213ENST00000566292 CAPN9O14815 690 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 GJB3O75712 270 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 IGLV3-25P01717 112 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 ATP5BP06576 529 aaKnown RBP18.99■□□□□ 0.63
USB1-213ENST00000566292 CD59P13987 128 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 GNSP15586 552 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 PON1P27169 355 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 USP8P40818 1118 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 GRIK2Q13002 908 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 TAF5Q15542 800 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 EXOC3L4Q17RC7 722 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 DCAF6Q58WW2 860 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 ZC3H12AQ5D1E8 599 aaKnown RBP18.99■□□□□ 0.63
USB1-213ENST00000566292 FSCBQ5H9T9 825 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 CFAP52Q8N1V2 620 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 CARNMT1Q8N4J0 409 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 ZCCHC9Q8N567 271 aaKnown RBP18.99■□□□□ 0.63
USB1-213ENST00000566292 ZNF557Q8N988 423 aaPredicted RBP18.99■□□□□ 0.63
USB1-213ENST00000566292 TTC17Q96AE7 1141 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 FAM81BQ96LP2 452 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 DDX50Q9BQ39 737 aaKnown RBP18.99■□□□□ 0.63
USB1-213ENST00000566292 MIR1-1HGQ9H1L0 117 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 MTG2Q9H4K7 406 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 SIX2Q9NPC8 291 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 AKAP13Q12802 2813 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 TMEM131Q92545 1883 aa18.99■□□□□ 0.63
USB1-213ENST00000566292 A0A1B0GTW7 788 aa18.98■□□□□ 0.63
USB1-213ENST00000566292 SPAARA0A1B0GVQ0 90 aa18.98■□□□□ 0.63
USB1-213ENST00000566292 TYW5A2RUC4 315 aaKnown RBP18.98■□□□□ 0.63
USB1-213ENST00000566292 TRUB2O95900 331 aaKnown RBP18.98■□□□□ 0.63
USB1-213ENST00000566292 SPINK2P20155 84 aa18.98■□□□□ 0.63
USB1-213ENST00000566292 ACSL1P33121 698 aa18.98■□□□□ 0.63
USB1-213ENST00000566292 CSKP41240 450 aa18.98■□□□□ 0.63
USB1-213ENST00000566292 RPS14P62263 151 aaKnown RBP18.98■□□□□ 0.63
USB1-213ENST00000566292 YWHAZP63104 245 aaKnown RBP18.98■□□□□ 0.63
USB1-213ENST00000566292 EIF4EBP2Q13542 120 aaPredicted RBP18.98■□□□□ 0.63
USB1-213ENST00000566292 MMS22LQ6ZRQ5 1243 aa18.98■□□□□ 0.63
USB1-213ENST00000566292 MLKLQ8NB16 471 aa18.98■□□□□ 0.63
USB1-213ENST00000566292 CPXM1Q96SM3 734 aa18.98■□□□□ 0.63
USB1-213ENST00000566292 TRIM62Q9BVG3 475 aa18.98■□□□□ 0.63
USB1-213ENST00000566292 THAP9Q9H5L6 903 aa18.98■□□□□ 0.63
USB1-213ENST00000566292 C6orf106Q9H6K1 298 aaPredicted RBP18.98■□□□□ 0.63
USB1-213ENST00000566292 FBRSQ9HAH7 460 aa18.98■□□□□ 0.63
USB1-213ENST00000566292 CHMP5Q9NZZ3 219 aa18.98■□□□□ 0.63
USB1-213ENST00000566292 EIF2B4Q9UI10 523 aaKnown RBP18.98■□□□□ 0.63
USB1-213ENST00000566292 TP53BP1Q12888 1972 aaPredicted RBP18.98■□□□□ 0.63
USB1-213ENST00000566292 KNL1Q8NG31 2342 aa18.98■□□□□ 0.63
USB1-213ENST00000566292 LUC7L3O95232 432 aaKnown RBP18.97■□□□□ 0.63
USB1-213ENST00000566292 APOEP02649 317 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms