RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 KIAA1324Q6UXG2 1013 aaKnown RBP17.34■□□□□ 0.37
USB1-211ENST00000565662 TRIM72Q6ZMU5 477 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 CHSY1Q86X52 802 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 CADM4Q8NFZ8 388 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 OR2T3Q8NH03 318 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 RNF34Q969K3 372 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 CPXM1Q96SM3 734 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 LSM14BQ9BX40 385 aaKnown RBP17.34■□□□□ 0.37
USB1-211ENST00000565662 TMEM9BQ9NQ34 198 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 SAMSN1Q9NSI8 373 aaKnown RBP17.34■□□□□ 0.37
USB1-211ENST00000565662 DDIT4Q9NX09 232 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 KIAA1522Q9P206 1035 aaPredicted RBP17.34■□□□□ 0.37
USB1-211ENST00000565662 USP36Q9P275 1121 aaKnown RBP17.34■□□□□ 0.37
USB1-211ENST00000565662 HCN2Q9UL51 889 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 TPX2Q9ULW0 747 aaKnown RBP17.34■□□□□ 0.37
USB1-211ENST00000565662 WDR87Q6ZQQ6 2873 aa17.34■□□□□ 0.37
USB1-211ENST00000565662 CEP192Q8TEP8 1941 aa17.33■□□□□ 0.37
USB1-211ENST00000565662 MUC22E2RYF6 1773 aaPredicted RBP17.33■□□□□ 0.37
USB1-211ENST00000565662 KCNU1A8MYU2 1149 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 F8VZ95 297 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 RNASEH1O60930 286 aaKnown RBP17.33■□□□□ 0.36
USB1-211ENST00000565662 LUC7L3O95232 432 aaKnown RBP17.33■□□□□ 0.36
USB1-211ENST00000565662 SRPRAP08240 638 aaKnown RBP17.33■□□□□ 0.36
USB1-211ENST00000565662 CYP11B1P15538 503 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 CD6P30203 668 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 CLCN1P35523 988 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 WASP42768 502 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 GABRB2P47870 512 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 CAMK2GQ13555 558 aaPredicted RBP17.33■□□□□ 0.36
USB1-211ENST00000565662 ARID5BQ14865 1188 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 SF3A2Q15428 464 aaKnown RBP17.33■□□□□ 0.36
USB1-211ENST00000565662 STPG1Q5TH74 334 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 RNF219Q5W0B1 726 aaPredicted RBP17.33■□□□□ 0.36
USB1-211ENST00000565662 MBLAC2Q68D91 279 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 OR6B2Q6IFH4 312 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 PPP1R2P3Q6NXS1 205 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 SLC23A3Q6PIS1 610 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 OLFML1Q6UWY5 402 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 ARCQ7LC44 396 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 SLC47A2Q86VL8 602 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 PIGKQ92643 395 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 C18orf8Q96DM3 657 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 PGAP3Q96FM1 320 aaPredicted RBP17.33■□□□□ 0.36
USB1-211ENST00000565662 SPAG5Q96R06 1193 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 ACOX2Q99424 681 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 NUP58Q9BVL2 599 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 NAA15Q9BXJ9 866 aaKnown RBP17.33■□□□□ 0.36
USB1-211ENST00000565662 CYTH4Q9UIA0 394 aa17.33■□□□□ 0.36
USB1-211ENST00000565662 H0Y626 953 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 MOCS2O96007 188 aaPredicted RBP17.32■□□□□ 0.36
USB1-211ENST00000565662 SYPP08247 313 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 PTMSP20962 102 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 MATKP42679 507 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 ZNF33AQ06730 810 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 EIF4EBP2Q13542 120 aaPredicted RBP17.32■□□□□ 0.36
USB1-211ENST00000565662 SYCP1Q15431 976 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 KIAA1211LQ6NV74 962 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 LRSAM1Q6UWE0 723 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 ERICH1Q86X53 443 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 TMPRSS6Q8IU80 811 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 PASD1Q8IV76 773 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 GPT2Q8TD30 523 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 RLN3Q8WXF3 142 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 TTC17Q96AE7 1141 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 ZDHHC5Q9C0B5 715 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 TMEM245Q9H330 911 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 ZDHHC4Q9NPG8 344 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 ITM2CQ9NQX7 267 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 PILRBQ9UKJ0 227 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 CYP8B1Q9UNU6 501 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 FHOD1Q9Y613 1164 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 DCHS1Q96JQ0 3298 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 ABCA7Q8IZY2 2146 aa17.32■□□□□ 0.36
USB1-211ENST00000565662 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.31■□□□□ 0.36
USB1-211ENST00000565662 LNP1A1A4G5 178 aa17.31■□□□□ 0.36
USB1-211ENST00000565662 CDK11BP21127 795 aaKnown RBP17.31■□□□□ 0.36
USB1-211ENST00000565662 TACR2P21452 398 aa17.31■□□□□ 0.36
USB1-211ENST00000565662 HOXC13P31276 330 aa17.31■□□□□ 0.36
USB1-211ENST00000565662 SLC6A4P31645 630 aa17.31■□□□□ 0.36
USB1-211ENST00000565662 VASPP50552 380 aaPredicted RBP17.31■□□□□ 0.36
USB1-211ENST00000565662 ATXN3P54252 364 aaPredicted RBP17.31■□□□□ 0.36
USB1-211ENST00000565662 KCNMA1Q12791 1236 aa17.31■□□□□ 0.36
USB1-211ENST00000565662 KRT31Q15323 416 aa17.31■□□□□ 0.36
USB1-211ENST00000565662 PTPN20Q4JDL3 420 aa17.31■□□□□ 0.36
USB1-211ENST00000565662 TRIM61Q5EBN2 209 aa17.31■□□□□ 0.36
USB1-211ENST00000565662 SYPL2Q5VXT5 272 aa17.31■□□□□ 0.36
USB1-211ENST00000565662 RFWD3Q6PCD5 774 aa17.31■□□□□ 0.36
USB1-211ENST00000565662 FAM183BPQ6ZVS7 135 aa17.31■□□□□ 0.36
USB1-211ENST00000565662 ADIPOR2Q86V24 386 aa17.31■□□□□ 0.36
USB1-211ENST00000565662 TMEFF1Q8IYR6 380 aa17.31■□□□□ 0.36
USB1-211ENST00000565662 DEFB106AQ8N104 65 aa17.31■□□□□ 0.36
USB1-211ENST00000565662 ZNF419Q96HQ0 510 aaPredicted RBP17.31■□□□□ 0.36
USB1-211ENST00000565662 PRICKLE1Q96MT3 831 aaPredicted RBP17.31■□□□□ 0.36
USB1-211ENST00000565662 TAB2Q9NYJ8 693 aa17.31■□□□□ 0.36
USB1-211ENST00000565662 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.31■□□□□ 0.36
USB1-211ENST00000565662 MBD1Q9UIS9 605 aaPredicted RBP17.31■□□□□ 0.36
USB1-211ENST00000565662 SLC6A14Q9UN76 642 aa17.31■□□□□ 0.36
USB1-211ENST00000565662 INVSQ9Y283 1065 aa17.31■□□□□ 0.36
USB1-211ENST00000565662 RAD54BQ9Y620 910 aa17.31■□□□□ 0.36
USB1-211ENST00000565662 TARSL2A2RTX5 802 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms