RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 TAGLN3Q9UI15 199 aa10.74□□□□□ -0.69
RNF40-204ENST00000563683 FAM237BA0A1B0GVD1 139 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 ARIH2O95376 493 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 ASLP04424 464 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 FGFR1P11362 822 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 PAMP19021 973 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 PNPLA4P41247 253 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 TPD52P55327 224 aaPredicted RBP10.73□□□□□ -0.69
RNF40-204ENST00000563683 PRAMEP78395 509 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 KLC3Q6P597 504 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 DRICH1Q6PGQ1 229 aaPredicted RBP10.73□□□□□ -0.69
RNF40-204ENST00000563683 SLC25A41Q8N5S1 370 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 BANPQ8N9N5 519 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 APOPT1Q96IL0 206 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 PLEKHG4BQ96PX9 1271 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 TBCBQ99426 244 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 PARK7Q99497 189 aaKnown RBP10.73□□□□□ -0.69
RNF40-204ENST00000563683 MECRQ9BV79 373 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 ZDHHC7Q9NXF8 308 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 ADA2Q9NZK5 511 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 HMGXB4Q9UGU5 601 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 CASTOR2A6NHX0 329 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 COQ9O75208 318 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 APOEP02649 317 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 DLDP09622 509 aaKnown RBP10.73□□□□□ -0.69
RNF40-204ENST00000563683 ICAM3P32942 547 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 STX1BP61266 288 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 MAP3K10Q02779 954 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 ULK2Q8IYT8 1036 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 C18orf25Q96B23 403 aaPredicted RBP10.73□□□□□ -0.69
RNF40-204ENST00000563683 PPP1R14BQ96C90 147 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 DGCR14Q96DF8 476 aaKnown RBP10.73□□□□□ -0.69
RNF40-204ENST00000563683 LRGUKQ96M69 825 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 LGMNQ99538 433 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 SERPINI1Q99574 410 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 MRPL45Q9BRJ2 306 aaKnown RBP10.73□□□□□ -0.69
RNF40-204ENST00000563683 HERPUD2Q9BSE4 406 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 SPON2Q9BUD6 331 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 EPB41L1Q9H4G0 881 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 MINDY3Q9H8M7 445 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 ZSCAN9O15535 394 aaPredicted RBP10.73□□□□□ -0.69
RNF40-204ENST00000563683 FDFT1P37268 417 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 AVPR1AP37288 418 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 OGDHQ02218 1023 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 B3GNT9Q6UX72 402 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 TSHZ1Q6ZSZ6 1077 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 PLEKHH3Q7Z736 793 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 STRA8Q7Z7C7 330 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 POU5F2Q8N7G0 328 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 SLC4A11Q8NBS3 891 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 NDRG1Q92597 394 aaKnown RBP10.73□□□□□ -0.69
RNF40-204ENST00000563683 NKD2Q969F2 451 aaPredicted RBP10.73□□□□□ -0.69
RNF40-204ENST00000563683 MAML3Q96JK9 1138 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 STRA6Q9BX79 667 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 GOLGA2P5Q9HBQ8 144 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 PTTG2Q9NZH5 202 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 PPME1Q9Y570 386 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 NUMBLQ9Y6R0 609 aa10.73□□□□□ -0.69
RNF40-204ENST00000563683 RNF103O00237 685 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 ENO3P13929 434 aaPredicted RBP10.72□□□□□ -0.69
RNF40-204ENST00000563683 UQCRBP14927 111 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 ETS2P15036 469 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 IL1R2P27930 398 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 KPNA2P52292 529 aaKnown RBP10.72□□□□□ -0.69
RNF40-204ENST00000563683 PRKD1Q15139 912 aaPredicted RBP10.72□□□□□ -0.69
RNF40-204ENST00000563683 RNASEH2BQ5TBB1 312 aaKnown RBP10.72□□□□□ -0.69
RNF40-204ENST00000563683 N4BP2L1Q5TBK1 243 aaPredicted RBP10.72□□□□□ -0.69
RNF40-204ENST00000563683 C4orf22Q6V702 233 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 ATPAF2Q8N5M1 289 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 MPP4Q96JB8 637 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 NUF2Q9BZD4 464 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 KCNK13Q9HB14 408 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 EPS15L1Q9UBC2 864 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 GOLGA8QA0A0J9YX86 632 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 GOLGA8OA6NCC3 632 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 GOLGA8NF8WBI6 632 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 CILPO75339 1184 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 GOT1P17174 413 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 TCN1P20061 433 aaPredicted RBP10.72□□□□□ -0.69
RNF40-204ENST00000563683 TPP2P29144 1249 aaPredicted RBP10.72□□□□□ -0.69
RNF40-204ENST00000563683 BEX3Q00994 111 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 GAD2Q05329 585 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 PMF1Q6P1K2 205 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 NLGN2Q8NFZ4 835 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 TMEM174Q8WUU8 243 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 CATSPER2Q96P56 530 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 TWNKQ96RR1 684 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 TRIM56Q9BRZ2 755 aaKnown RBP10.72□□□□□ -0.69
RNF40-204ENST00000563683 KLHL4Q9C0H6 718 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 NMUR2Q9GZQ4 415 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 ABHD16BQ9H3Z7 469 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 FAM96AQ9H5X1 160 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 NRDE2Q9H7Z3 1164 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 RABGEF1Q9UJ41 708 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 TBC1D30Q9Y2I9 924 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 C2orf71A6NGG8 1288 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 CELF2O95319 508 aaKnown RBP10.72□□□□□ -0.69
RNF40-204ENST00000563683 ITGA2BP08514 1039 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 PCSK1P29120 753 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 USP46P62068 366 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms