RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 ARID5BQ14865 1188 aa12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 TAF5Q15542 800 aa12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 ZC3H12AQ5D1E8 599 aaKnown RBP12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 ACBD5Q5T8D3 534 aaPredicted RBP12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 LYSMD4Q5XG99 296 aa12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 MBLAC2Q68D91 279 aa12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 OR6B2Q6IFH4 312 aa12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 SERPINA13PQ6UXR4 307 aa12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 FAM183BPQ6ZVS7 135 aa12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 RABEPKQ7Z6M1 372 aa12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 SYT12Q8IV01 421 aa12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 CCDC117Q8IWD4 279 aaPredicted RBP12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 MSANTD4Q8NCY6 345 aa12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 ADAM32Q8TC27 787 aa12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 EPS8L1Q8TE68 723 aa12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 NT5C3BQ969T7 300 aa12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 PGAP3Q96FM1 320 aaPredicted RBP12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 PRMT1Q99873 361 aaKnown RBP12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 NUCKS1Q9H1E3 243 aaKnown RBP12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 VPS16Q9H269 839 aa12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 SYNCQ9H7C4 482 aa12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 PRDM16Q9HAZ2 1276 aa12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 ITM2CQ9NQX7 267 aa12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 DDIT4Q9NX09 232 aa12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 SIK3Q9Y2K2 1263 aa12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 RAD54BQ9Y620 910 aa12.66□□□□□ -0.38
NSMCE1-204ENST00000563273 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 TM4SF5O14894 197 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 KHNYNO15037 678 aaKnown RBP12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 GDF9O60383 454 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 LUC7L3O95232 432 aaKnown RBP12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 POLR2EP19388 210 aaKnown RBP12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 ABCB4P21439 1286 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 TACR2P21452 398 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 PRKCHP24723 683 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 CD70P32970 193 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 MATKP42679 507 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 COPB1P53618 953 aaKnown RBP12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 COPAP53621 1224 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 OXCT1P55809 520 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 JAM2P57087 298 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 RPS24P62847 133 aaKnown RBP12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 PITX1P78337 314 aaPredicted RBP12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 RPL6Q02878 288 aaKnown RBP12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 ZBTB16Q05516 673 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 SLC12A1Q13621 1099 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 CDH18Q13634 790 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 PTPRNQ16849 979 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 STPG1Q5TH74 334 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 NOP9Q86U38 636 aaKnown RBP12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 CHSY1Q86X52 802 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 TMEFF1Q8IYR6 380 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 OR2T3Q8NH03 318 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 CEP76Q8TAP6 659 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 WFDC5Q8TCV5 224 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 FOXJ1Q92949 421 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 C18orf8Q96DM3 657 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 ZNF419Q96HQ0 510 aaPredicted RBP12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 ERGIC2Q96RQ1 377 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 NPY6RQ99463 290 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 BPIFA3Q9BQP9 254 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 MKRN2Q9H000 416 aaKnown RBP12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 PCED1AQ9H1Q7 454 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 PDCL3Q9H2J4 239 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 FAM204AQ9H8W3 233 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 KIAA1522Q9P206 1035 aaPredicted RBP12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 SUN2Q9UH99 717 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 XPO7Q9UIA9 1087 aaKnown RBP12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 NOCTQ9UK39 431 aaKnown RBP12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 PILRBQ9UKJ0 227 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 STAP1Q9ULZ2 295 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 DNAH14Q0VDD8 3507 aa12.65□□□□□ -0.38
NSMCE1-204ENST00000563273 ATG2BQ96BY7 2078 aa12.65□□□□□ -0.39
NSMCE1-204ENST00000563273 LNP1A1A4G5 178 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 F5H5T6 163 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 MOCS2O96007 188 aaPredicted RBP12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 F9P00740 461 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 EPHX1P07099 455 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 SRPRAP08240 638 aaKnown RBP12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 CD6P30203 668 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 SOX5P35711 763 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 PTGER3P43115 390 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 VASPP50552 380 aaPredicted RBP12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 NOMO3P69849 1222 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 CDR2Q01850 454 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 LMAN2Q12907 356 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 NCAPHQ15003 741 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 CCDC6Q16204 474 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 C5orf22Q49AR2 442 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 FNDC3BQ53EP0 1204 aaKnown RBP12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 BRMS1LQ5PSV4 323 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 RABGAP1LQ5R372 815 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 SLC23A3Q6PIS1 610 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 KIAA1324Q6UXG2 1013 aaKnown RBP12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 TRIM72Q6ZMU5 477 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 ERICH1Q86X53 443 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 XYLT1Q86Y38 959 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 TMPRSS6Q8IU80 811 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 LGI2Q8N0V4 545 aa12.64□□□□□ -0.39
NSMCE1-204ENST00000563273 FRMD1Q8N878 549 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms