RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 MYL5Q02045 173 aa11.5□□□□□ -0.57
LPCAT4-202ENST00000562404 LMAN2Q12907 356 aa11.5□□□□□ -0.57
LPCAT4-202ENST00000562404 PUM1Q14671 1186 aaKnown RBP eCLIP11.5□□□□□ -0.57
LPCAT4-202ENST00000562404 SYCP1Q15431 976 aa11.5□□□□□ -0.57
LPCAT4-202ENST00000562404 RAP1GAP2Q684P5 730 aa11.5□□□□□ -0.57
LPCAT4-202ENST00000562404 SLC26A9Q7LBE3 791 aa11.5□□□□□ -0.57
LPCAT4-202ENST00000562404 CIR1Q86X95 450 aaPredicted RBP11.5□□□□□ -0.57
LPCAT4-202ENST00000562404 AOPEPQ8N6M6 819 aa11.5□□□□□ -0.57
LPCAT4-202ENST00000562404 MYO19Q96H55 970 aa11.5□□□□□ -0.57
LPCAT4-202ENST00000562404 PRMT1Q99873 361 aaKnown RBP11.5□□□□□ -0.57
LPCAT4-202ENST00000562404 TMEM245Q9H330 911 aa11.5□□□□□ -0.57
LPCAT4-202ENST00000562404 MTG2Q9H4K7 406 aa11.5□□□□□ -0.57
LPCAT4-202ENST00000562404 ASNSD1Q9NWL6 643 aa11.5□□□□□ -0.57
LPCAT4-202ENST00000562404 DDIT4Q9NX09 232 aa11.5□□□□□ -0.57
LPCAT4-202ENST00000562404 NOCTQ9UK39 431 aaKnown RBP11.5□□□□□ -0.57
LPCAT4-202ENST00000562404 CNOT1A5YKK6 2376 aaKnown RBP11.5□□□□□ -0.57
LPCAT4-202ENST00000562404 ATXN2Q99700 1313 aaKnown RBP11.5□□□□□ -0.57
LPCAT4-202ENST00000562404 PCDH15Q96QU1 1955 aa11.5□□□□□ -0.57
LPCAT4-202ENST00000562404 LRRC10BA6NIK2 292 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 PRR5-ARHGAP8B1AHC4 643 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 HSF2BPO75031 334 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 DAB1O75553 588 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 CAVIN2O95810 425 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 GLI1P08151 1106 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 TACR2P21452 398 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 GABRB2P47870 512 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 ZNF445P59923 1031 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 NOMO3P69849 1222 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 ARHGAP8P85298 464 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 FMO1Q01740 532 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 EIF4HQ15056 248 aaKnown RBP11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 ANO6Q4KMQ2 910 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 RAB6CQ53S08 254 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 EFHC1Q5JVL4 640 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 MPP7Q5T2T1 576 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 ARTNQ5T4W7 220 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 MBLAC2Q68D91 279 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 SMYD5Q6GMV2 418 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 SDE2Q6IQ49 451 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 CAVIN1Q6NZI2 390 aaKnown RBP11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 CACUL1Q86Y37 369 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 XYLT1Q86Y38 959 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 SLC41A1Q8IVJ1 513 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 MFN1Q8IWA4 741 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 DHX40Q8IX18 779 aaKnown RBP11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 LGI2Q8N0V4 545 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 CARNMT1Q8N4J0 409 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 HJURPQ8NCD3 748 aaPredicted RBP11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 ZNF397Q8NF99 534 aaPredicted RBP11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 FIBINQ8TAL6 211 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 CPA5Q8WXQ8 436 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 RAB6CQ9H0N0 254 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 FAM204AQ9H8W3 233 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 TMPRSS4Q9NRS4 437 aa11.49□□□□□ -0.57
LPCAT4-202ENST00000562404 DOCK9Q9BZ29 2069 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 LGALS16A8MUM7 142 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 SLC30A4O14863 429 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 TEX33O43247 280 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 APOEP02649 317 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 EPHX1P07099 455 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 ITPKAP23677 461 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 SOX5P35711 763 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 FLT3P36888 993 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 CTSOP43234 321 aaPredicted RBP11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 BPIFB4P59827 614 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 RNASE9P60153 205 aaKnown RBP11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 CDK17Q00537 523 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 CENPCQ03188 943 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 NME3Q13232 169 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 AASDHQ4L235 1098 aaPredicted RBP11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 NAA35Q5VZE5 725 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 KIAA1324Q6UXG2 1013 aaKnown RBP11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 SERPINA13PQ6UXR4 307 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 DGLUCYQ7Z3D6 616 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 PHLDB2Q86SQ0 1253 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 C14orf80Q86SX3 495 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 CHSY1Q86X52 802 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 TMPRSS6Q8IU80 811 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 APCDD1Q8J025 514 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 TMEM35BQ8NCS4 154 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 OR52K2Q8NGK3 314 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 WFIKKN2Q8TEU8 576 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 UCMAQ8WVF2 138 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 PIGKQ92643 395 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 IGSF8Q969P0 613 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 NT5C3BQ969T7 300 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 C18orf8Q96DM3 657 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 BTN2A3PQ96KV6 586 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 SPACA7Q96KW9 195 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 MRGPRX3Q96LB0 322 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 NOX5Q96PH1 765 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 PCDHB18PQ96TA0 734 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 NPY6RQ99463 290 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 FUCA2Q9BTY2 467 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 PRDM16Q9HAZ2 1276 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 FSCN3Q9NQT6 498 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 VPS45Q9NRW7 570 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 PIGVQ9NUD9 493 aa11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.48□□□□□ -0.57
LPCAT4-202ENST00000562404 CDV3Q9UKY7 258 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms