RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 TCF15Q12870 199 aa17.3■□□□□ 0.36
CLK3-207ENST00000562389 SLC18A3Q16572 532 aa17.3■□□□□ 0.36
CLK3-207ENST00000562389 CDO1Q16878 200 aa17.3■□□□□ 0.36
CLK3-207ENST00000562389 C10orf76Q5T2E6 689 aa17.3■□□□□ 0.36
CLK3-207ENST00000562389 TTC39BQ5VTQ0 682 aaPredicted RBP17.3■□□□□ 0.36
CLK3-207ENST00000562389 PKN3Q6P5Z2 889 aa17.3■□□□□ 0.36
CLK3-207ENST00000562389 ANKS1BQ7Z6G8 1248 aa17.3■□□□□ 0.36
CLK3-207ENST00000562389 MAML2Q8IZL2 1156 aaPredicted RBP17.3■□□□□ 0.36
CLK3-207ENST00000562389 LGI2Q8N0V4 545 aa17.3■□□□□ 0.36
CLK3-207ENST00000562389 TC2NQ8N9U0 490 aa17.3■□□□□ 0.36
CLK3-207ENST00000562389 RPLP0P6Q8NHW5 317 aa17.3■□□□□ 0.36
CLK3-207ENST00000562389 KCNV2Q8TDN2 545 aa17.3■□□□□ 0.36
CLK3-207ENST00000562389 FAM172AQ8WUF8 416 aa17.3■□□□□ 0.36
CLK3-207ENST00000562389 ACDQ96AP0 544 aa17.3■□□□□ 0.36
CLK3-207ENST00000562389 MYEOVQ96EZ4 313 aa17.3■□□□□ 0.36
CLK3-207ENST00000562389 ANLNQ9NQW6 1124 aa17.3■□□□□ 0.36
CLK3-207ENST00000562389 FBXO4Q9UKT5 387 aa17.3■□□□□ 0.36
CLK3-207ENST00000562389 STARD13Q9Y3M8 1113 aa17.3■□□□□ 0.36
CLK3-207ENST00000562389 HS3ST4Q9Y661 456 aa17.3■□□□□ 0.36
CLK3-207ENST00000562389 I6L893 689 aaPredicted RBP17.29■□□□□ 0.36
CLK3-207ENST00000562389 CCP110O43303 1012 aa17.29■□□□□ 0.36
CLK3-207ENST00000562389 KIR2DL1P43626 348 aaPredicted RBP17.29■□□□□ 0.36
CLK3-207ENST00000562389 PTPN5P54829 565 aa17.29■□□□□ 0.36
CLK3-207ENST00000562389 SEC13P55735 322 aa17.29■□□□□ 0.36
CLK3-207ENST00000562389 HDAC4P56524 1084 aa17.29■□□□□ 0.36
CLK3-207ENST00000562389 RPS24P62847 133 aaKnown RBP17.29■□□□□ 0.36
CLK3-207ENST00000562389 AUHQ13825 339 aaKnown RBP17.29■□□□□ 0.36
CLK3-207ENST00000562389 HSF5Q4G112 596 aaPredicted RBP17.29■□□□□ 0.36
CLK3-207ENST00000562389 CCDC122Q5T0U0 273 aa17.29■□□□□ 0.36
CLK3-207ENST00000562389 SH3PXD2AQ5TCZ1 1133 aa17.29■□□□□ 0.36
CLK3-207ENST00000562389 FAM131BQ86XD5 332 aa17.29■□□□□ 0.36
CLK3-207ENST00000562389 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.29■□□□□ 0.36
CLK3-207ENST00000562389 FNIP1Q8TF40 1166 aa17.29■□□□□ 0.36
CLK3-207ENST00000562389 HAPLN3Q96S86 360 aa17.29■□□□□ 0.36
CLK3-207ENST00000562389 CNPY3Q9BT09 278 aa17.29■□□□□ 0.36
CLK3-207ENST00000562389 DEF6Q9H4E7 631 aa17.29■□□□□ 0.36
CLK3-207ENST00000562389 MRPL47Q9HD33 250 aaKnown RBP17.29■□□□□ 0.36
CLK3-207ENST00000562389 PRRT4C9JH25 899 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 DESP17661 470 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 HLA-FP30511 346 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 CXCL12P48061 93 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 SATB1Q01826 763 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 OGDHQ02218 1023 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 GFPT1Q06210 699 aaPredicted RBP17.28■□□□□ 0.36
CLK3-207ENST00000562389 ARL13BQ3SXY8 428 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 C5orf22Q49AR2 442 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 RAB6CQ53S08 254 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 RABGAP1LQ5R372 815 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 FBXL22Q6P050 247 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 KIAA0907Q7Z7F0 614 aaPredicted RBP17.28■□□□□ 0.36
CLK3-207ENST00000562389 MFN1Q8IWA4 741 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 FIBINQ8TAL6 211 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 WFDC5Q8TCV5 224 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 WFIKKN2Q8TEU8 576 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 C1orf74Q96LT6 269 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 CHP1Q99653 195 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 RAB6CQ9H0N0 254 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 THAP2Q9H0W7 228 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 IRF2BPLQ9H1B7 796 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 NHEJ1Q9H9Q4 299 aaPredicted RBP17.28■□□□□ 0.36
CLK3-207ENST00000562389 STIM2Q9P246 746 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 MYO1AQ9UBC5 1043 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 MYO18AQ92614 2054 aaKnown RBP17.28■□□□□ 0.36
CLK3-207ENST00000562389 DOCK4Q8N1I0 1966 aa17.28■□□□□ 0.36
CLK3-207ENST00000562389 A0A1B0GVM2 712 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 ANTXRLA6NF34 631 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 TCAF2A6NFQ2 919 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 TMEM191CA6NGB0 347 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 LUC7L3O95232 432 aaKnown RBP17.27■□□□□ 0.36
CLK3-207ENST00000562389 TDGF1P13385 188 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 CDC25BP30305 580 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 TIE1P35590 1138 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 EIF4HQ15056 248 aaKnown RBP17.27■□□□□ 0.36
CLK3-207ENST00000562389 GEN1Q17RS7 908 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 ZNF528Q3MIS6 628 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 C2orf27AQ580R0 203 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 SYT13Q7L8C5 426 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 TRMT11Q7Z4G4 463 aaKnown RBP17.27■□□□□ 0.36
CLK3-207ENST00000562389 CFAP52Q8N1V2 620 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 ZNF513Q8N8E2 541 aaPredicted RBP17.27■□□□□ 0.36
CLK3-207ENST00000562389 IL17RCQ8NAC3 791 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 NTAN1Q96AB6 310 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 RPRD1AQ96P16 312 aaPredicted RBP17.27■□□□□ 0.36
CLK3-207ENST00000562389 SIK2Q9H0K1 926 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 TMPRSS4Q9NRS4 437 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 C2orf42Q9NWW7 574 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 RAPGEFL1Q9UHV5 662 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 GGA2Q9UJY4 613 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 HCN2Q9UL51 889 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 VANGL2Q9ULK5 521 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 MMP17Q9ULZ9 603 aa17.27■□□□□ 0.36
CLK3-207ENST00000562389 FANCMQ8IYD8 2048 aa17.26■□□□□ 0.35
CLK3-207ENST00000562389 MUC22E2RYF6 1773 aaPredicted RBP17.26■□□□□ 0.35
CLK3-207ENST00000562389 H0Y858 1186 aa17.26■□□□□ 0.35
CLK3-207ENST00000562389 AKR1B10O60218 316 aa17.26■□□□□ 0.35
CLK3-207ENST00000562389 CYP1A2P05177 515 aa17.26■□□□□ 0.35
CLK3-207ENST00000562389 SP9P0CG40 484 aa17.26■□□□□ 0.35
CLK3-207ENST00000562389 PABPC1P11940 636 aaKnown RBP17.26■□□□□ 0.35
CLK3-207ENST00000562389 PSMA2P25787 234 aa17.26■□□□□ 0.35
CLK3-207ENST00000562389 ADRA1BP35368 520 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms