RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 AOC1P19801 751 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 L1CAMP32004 1257 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 ETFBP38117 255 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 DGKGP49619 791 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 VAV2P52735 878 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 CDH4P55283 916 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 PITX1P78337 314 aaPredicted RBP12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 KIF5AQ12840 1032 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 AUHQ13825 339 aaKnown RBP12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 C15orf59Q2T9L4 293 aaPredicted RBP12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 TMEM31Q5JXX7 168 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 ERMARDQ5T6L9 678 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 OTUD1Q5VV17 481 aaPredicted RBP12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 FYB2Q5VWT5 728 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 ASTLQ6HA08 431 aaPredicted RBP12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 GRAMD4Q6IC98 578 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 TRNP1Q6NT89 227 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 ZNF783Q6ZMS7 281 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 TPGS1Q6ZTW0 290 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 PHLDB2Q86SQ0 1253 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 FAM131BQ86XD5 332 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 ETFBKMTQ8IXQ9 262 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 ST13P5Q8NFI4 369 aaPredicted RBP12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 PJA1Q8NG27 643 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 FIBINQ8TAL6 211 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 SLC35G2Q8TBE7 412 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 TEKT4Q8WW24 435 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 WBP2Q969T9 261 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 CLDN23Q96B33 292 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 EPAS1Q99814 870 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 PRMT1Q99873 361 aaKnown RBP12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 TSGA10Q9BZW7 698 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 ARHGEF4Q9NR80 690 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 STIM2Q9P246 746 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 OR12D3Q9UGF7 316 aa12.46□□□□□ -0.41
RABGGTA-215ENST00000560207 IGLV3-10A0A075B6K4 115 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 CXorf51AA0A1B0GTR3 108 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 SOWAHDA6NJG2 315 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 FAM170BA6NMN3 283 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 FGF10O15520 208 aaPredicted RBP12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 PJA2O43164 708 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 ATMINO43313 823 aaPredicted RBP12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 PROSCO94903 275 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 KAT7O95251 611 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 KRT7P08729 469 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 OPRD1P41143 372 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 HCAR3P49019 387 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 GALK1P51570 392 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 MRPS21P82921 87 aaKnown RBP12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 SCYL2Q6P3W7 929 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 POLNQ7Z5Q5 900 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 KIAA1328Q86T90 577 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 SETD3Q86TU7 594 aaPredicted RBP12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 TMEM139Q8IV31 216 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 MAP7D3Q8IWC1 876 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 LGI2Q8N0V4 545 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 RNF10Q8N5U6 811 aaKnown RBP12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 RPRD1AQ96P16 312 aaPredicted RBP12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 ZYG11BQ9C0D3 744 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 SIK2Q9H0K1 926 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 CATSPERBQ9H7T0 1116 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 PRDM16Q9HAZ2 1276 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 DNAJC17Q9NVM6 304 aaKnown RBP12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 KIAA1522Q9P206 1035 aaPredicted RBP12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 USP18Q9UMW8 372 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 STARD13Q9Y3M8 1113 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 HS3ST4Q9Y661 456 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 CHD5Q8TDI0 1954 aa12.45□□□□□ -0.42
RABGGTA-215ENST00000560207 MYO18AQ92614 2054 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 OTOL1A6NHN0 477 aaPredicted RBP12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 DRGXA6NNA5 263 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 H0Y626 953 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 KRT86O43790 486 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 TBL1XO60907 577 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 LRCH4O75427 683 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 LUC7L3O95232 432 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 PTMAP06454 111 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 HOXD9P28356 352 aaPredicted RBP12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 SLC6A4P31645 630 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 NOP2P46087 812 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 SULT2A1Q06520 285 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 ZNF177Q13360 481 aaPredicted RBP12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 CDH18Q13634 790 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 CCINQ13939 588 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 UBXN2BQ14CS0 331 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 C6orf118Q5T5N4 469 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 LRRC38Q5VT99 294 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 RAP1GAP2Q684P5 730 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 NADSYN1Q6IA69 706 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 FBXL22Q6P050 247 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 ZNF662Q6ZS27 426 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 ANKS1BQ7Z6G8 1248 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 VSIG1Q86XK7 387 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 MFN1Q8IWA4 741 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 AHI1Q8N157 1196 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 TERB1Q8NA31 727 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 FLCNQ8NFG4 579 aa12.44□□□□□ -0.42
RABGGTA-215ENST00000560207 ACDQ96AP0 544 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms