RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 ZNF670Q9BS34 389 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 HERPUD2Q9BSE4 406 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 TUBB2BQ9BVA1 445 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 UBE2ZQ9H832 354 aaPredicted RBP10.78□□□□□ -0.68
TPM1-221ENST00000559831 GDE1Q9NZC3 331 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 STIM2Q9P246 746 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 AGO1Q9UL18 857 aaKnown RBP10.78□□□□□ -0.68
TPM1-221ENST00000559831 CDH7Q9ULB5 785 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 ZNF510Q9Y2H8 683 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 USP15Q9Y4E8 981 aaPredicted RBP10.78□□□□□ -0.68
TPM1-221ENST00000559831 MRFAP1Q9Y605 127 aa10.78□□□□□ -0.68
TPM1-221ENST00000559831 KIF26AQ9ULI4 1882 aaPredicted RBP10.77□□□□□ -0.69
TPM1-221ENST00000559831 TCRBV7S2A1N4TA0A589 114 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 PDE2AO00408 941 aaPredicted RBP10.77□□□□□ -0.69
TPM1-221ENST00000559831 APOL1O14791 398 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 TSPAN3O60637 253 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 CST8O60676 142 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 LATS1O95835 1130 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 SP100P23497 879 aaPredicted RBP10.77□□□□□ -0.69
TPM1-221ENST00000559831 IL4RP24394 825 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 EPHB2P29323 1055 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 SLC6A4P31645 630 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 PTPN7P35236 360 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 VIPR2P41587 438 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 VCPP55072 806 aaKnown RBP10.77□□□□□ -0.69
TPM1-221ENST00000559831 MLLT6P55198 1093 aaPredicted RBP10.77□□□□□ -0.69
TPM1-221ENST00000559831 CKAP4Q07065 602 aaKnown RBP10.77□□□□□ -0.69
TPM1-221ENST00000559831 USP4Q13107 963 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 SEMA3BQ13214 749 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 TFDP2Q14188 446 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 ZNF77Q15935 545 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 FAM133BQ5BKY9 247 aaKnown RBP10.77□□□□□ -0.69
TPM1-221ENST00000559831 ADGRF1Q5T601 910 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 C1orf228Q6PIY5 440 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 Q6ZNB5 142 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 RFX8Q6ZV50 586 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 HTR3DQ70Z44 454 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 CREG2Q8IUH2 290 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 BBS7Q8IWZ6 715 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 CELF5Q8N6W0 485 aaKnown RBP10.77□□□□□ -0.69
TPM1-221ENST00000559831 ACTRT1Q8TDG2 376 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 SMARCD2Q92925 531 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 AZIN2Q96A70 460 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 HAUS1Q96CS2 278 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 C1orf74Q96LT6 269 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 ASB16Q96NS5 453 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 NECTIN4Q96NY8 510 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 RPRD1AQ96P16 312 aaPredicted RBP10.77□□□□□ -0.69
TPM1-221ENST00000559831 RNF157Q96PX1 679 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 NAP1L3Q99457 506 aaPredicted RBP10.77□□□□□ -0.69
TPM1-221ENST00000559831 PRMT1Q99873 361 aaKnown RBP10.77□□□□□ -0.69
TPM1-221ENST00000559831 DDX50Q9BQ39 737 aaKnown RBP10.77□□□□□ -0.69
TPM1-221ENST00000559831 AP1M1Q9BXS5 423 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 KIF9Q9HAQ2 790 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 ARHGEF4Q9NR80 690 aa10.77□□□□□ -0.69
TPM1-221ENST00000559831 RCOR3Q9P2K3 495 aaPredicted RBP10.77□□□□□ -0.69
TPM1-221ENST00000559831 E2F8A0AVK6 867 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 GRXCR2A6NFK2 248 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 KRIT1O00522 736 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 GREM1O60565 184 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 TJP3O95049 919 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 WEE1P30291 646 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 HCAR3P49019 387 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 IRAK1P51617 712 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 ZNF135P52742 658 aaPredicted RBP10.76□□□□□ -0.69
TPM1-221ENST00000559831 NRG1Q02297 640 aaPredicted RBP10.76□□□□□ -0.69
TPM1-221ENST00000559831 ADCY2Q08462 1091 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 SMAD4Q13485 552 aaKnown RBP10.76□□□□□ -0.69
TPM1-221ENST00000559831 DPYSQ14117 519 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 TAZQ16635 292 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 ACBD5Q5T8D3 534 aaPredicted RBP10.76□□□□□ -0.69
TPM1-221ENST00000559831 MANEALQ5VSG8 457 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 FBXL22Q6P050 247 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 CIR1Q86X95 450 aaPredicted RBP10.76□□□□□ -0.69
TPM1-221ENST00000559831 VSIG1Q86XK7 387 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 CFAP52Q8N1V2 620 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 PQLC3Q8N755 202 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 PCDH19Q8TAB3 1148 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 RIN3Q8TB24 985 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 MAIP1Q8WWC4 291 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 SUSD6Q92537 303 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 HLA-CQ95604 372 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 IGSF8Q969P0 613 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 FAF2Q96CS3 445 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 RSPRY1Q96DX4 576 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 MYEOVQ96EZ4 313 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 CATSPERBQ9H7T0 1116 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 ETNK2Q9NVF9 386 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 MPP6Q9NZW5 540 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 RNF14Q9UBS8 474 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 TTC7AQ9ULT0 858 aaPredicted RBP10.76□□□□□ -0.69
TPM1-221ENST00000559831 MFHAS1Q9Y4C4 1052 aa10.76□□□□□ -0.69
TPM1-221ENST00000559831 NYNRINQ9P2P1 1898 aaKnown RBP10.75□□□□□ -0.69
TPM1-221ENST00000559831 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.75□□□□□ -0.69
TPM1-221ENST00000559831 GOLGA6L10A0A0M3HER8 536 aa10.75□□□□□ -0.69
TPM1-221ENST00000559831 TYW5A2RUC4 315 aaKnown RBP10.75□□□□□ -0.69
TPM1-221ENST00000559831 HEPACAM2A8MVW5 462 aa10.75□□□□□ -0.69
TPM1-221ENST00000559831 ZNF487B1APH4 448 aa10.75□□□□□ -0.69
TPM1-221ENST00000559831 FGF10O15520 208 aaPredicted RBP10.75□□□□□ -0.69
TPM1-221ENST00000559831 MBTPS2O43462 519 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms