RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 IL17RCQ8NAC3 791 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 SORCS1Q8WY21 1168 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 IGSF8Q969P0 613 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 EXOC4Q96A65 974 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 HHIPQ96QV1 700 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 DNAJC7Q99615 494 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 PRRX2Q99811 253 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 IER2Q9BTL4 223 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.37■□□□□ 0.69
CASC4-209ENST00000559222 TKTL2Q9H0I9 626 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 RRN3Q9NYV6 651 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 NENFQ9UMX5 172 aa19.37■□□□□ 0.69
CASC4-209ENST00000559222 DOCK4Q8N1I0 1966 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 SIGLEC16A6NMB1 481 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 CCP110O43303 1012 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 ADAM23O75077 832 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 ABCB4P21439 1286 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 GPD1P21695 349 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 HNRNPH3P31942 346 aaKnown RBP19.36■□□□□ 0.69
CASC4-209ENST00000559222 CD70P32970 193 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 RDXP35241 583 aaKnown RBP19.36■□□□□ 0.69
CASC4-209ENST00000559222 EIF4A3P38919 411 aaKnown RBP19.36■□□□□ 0.69
CASC4-209ENST00000559222 TNFRSF4P43489 277 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 HDAC4P56524 1084 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 ZNF252P-AS1Q0IIN9 211 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 ARID5BQ14865 1188 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 FSCBQ5H9T9 825 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 FBXL22Q6P050 247 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 TMEM92Q6UXU6 159 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 TXNDC5Q8NBS9 432 aaKnown RBP19.36■□□□□ 0.69
CASC4-209ENST00000559222 HJURPQ8NCD3 748 aaPredicted RBP19.36■□□□□ 0.69
CASC4-209ENST00000559222 ATOH1Q92858 354 aaPredicted RBP19.36■□□□□ 0.69
CASC4-209ENST00000559222 ZNF653Q96CK0 615 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 LMLNQ96KR4 655 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 SIK2Q9H0K1 926 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 ABHD10Q9NUJ1 306 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 ABCB8Q9NUT2 735 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 FBXO4Q9UKT5 387 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 SLC27A6Q9Y2P4 619 aa19.36■□□□□ 0.69
CASC4-209ENST00000559222 RTN2O75298 545 aa19.35■□□□□ 0.69
CASC4-209ENST00000559222 ENDOD1O94919 500 aa19.35■□□□□ 0.69
CASC4-209ENST00000559222 SDC4P31431 198 aa19.35■□□□□ 0.69
CASC4-209ENST00000559222 PTPN9P43378 593 aa19.35■□□□□ 0.69
CASC4-209ENST00000559222 MAMLD1Q13495 774 aa19.35■□□□□ 0.69
CASC4-209ENST00000559222 AUHQ13825 339 aaKnown RBP19.35■□□□□ 0.69
CASC4-209ENST00000559222 TRIM14Q14142 442 aa19.35■□□□□ 0.69
CASC4-209ENST00000559222 DMC1Q14565 340 aa19.35■□□□□ 0.69
CASC4-209ENST00000559222 HEATR6Q6AI08 1181 aaKnown RBP19.35■□□□□ 0.69
CASC4-209ENST00000559222 PLEKHA7Q6IQ23 1121 aa19.35■□□□□ 0.69
CASC4-209ENST00000559222 MAMSTRQ6ZN01 415 aa19.35■□□□□ 0.69
CASC4-209ENST00000559222 ZNF683Q8IZ20 524 aa19.35■□□□□ 0.69
CASC4-209ENST00000559222 CARNMT1Q8N4J0 409 aa19.35■□□□□ 0.69
CASC4-209ENST00000559222 CCDC185Q8N715 623 aa19.35■□□□□ 0.69
CASC4-209ENST00000559222 ZNF513Q8N8E2 541 aaPredicted RBP19.35■□□□□ 0.69
CASC4-209ENST00000559222 FAM172AQ8WUF8 416 aa19.35■□□□□ 0.69
CASC4-209ENST00000559222 CHP1Q99653 195 aa19.35■□□□□ 0.69
CASC4-209ENST00000559222 ISCUQ9H1K1 167 aa19.35■□□□□ 0.69
CASC4-209ENST00000559222 WDCPQ9H6R7 721 aa19.35■□□□□ 0.69
CASC4-209ENST00000559222 MYO1AQ9UBC5 1043 aa19.35■□□□□ 0.69
CASC4-209ENST00000559222 CNOT8Q9UFF9 292 aaKnown RBP19.35■□□□□ 0.69
CASC4-209ENST00000559222 VANGL2Q9ULK5 521 aa19.35■□□□□ 0.69
CASC4-209ENST00000559222 NYNRINQ9P2P1 1898 aaKnown RBP19.35■□□□□ 0.69
CASC4-209ENST00000559222 F5H5T6 163 aa19.34■□□□□ 0.69
CASC4-209ENST00000559222 PAPSS2O95340 614 aaPredicted RBP19.34■□□□□ 0.69
CASC4-209ENST00000559222 SLC2A3P11169 496 aa19.34■□□□□ 0.69
CASC4-209ENST00000559222 GZMAP12544 262 aa19.34■□□□□ 0.69
CASC4-209ENST00000559222 FNTBP49356 437 aa19.34■□□□□ 0.69
CASC4-209ENST00000559222 MRPS21P82921 87 aaKnown RBP19.34■□□□□ 0.69
CASC4-209ENST00000559222 LMAN2Q12907 356 aa19.34■□□□□ 0.69
CASC4-209ENST00000559222 FUT11Q495W5 492 aa19.34■□□□□ 0.69
CASC4-209ENST00000559222 BRMS1LQ5PSV4 323 aa19.34■□□□□ 0.69
CASC4-209ENST00000559222 ANKS1BQ7Z6G8 1248 aa19.34■□□□□ 0.69
CASC4-209ENST00000559222 OR52K2Q8NGK3 314 aa19.34■□□□□ 0.69
CASC4-209ENST00000559222 CENPIQ92674 756 aaPredicted RBP19.34■□□□□ 0.69
CASC4-209ENST00000559222 NELL1Q92832 810 aa19.34■□□□□ 0.69
CASC4-209ENST00000559222 ARHGEF26Q96DR7 871 aa19.34■□□□□ 0.69
CASC4-209ENST00000559222 DDX50Q9BQ39 737 aaKnown RBP19.34■□□□□ 0.69
CASC4-209ENST00000559222 GGA2Q9UJY4 613 aa19.34■□□□□ 0.69
CASC4-209ENST00000559222 INTS6Q9UL03 887 aaKnown RBP19.34■□□□□ 0.69
CASC4-209ENST00000559222 MMP17Q9ULZ9 603 aa19.34■□□□□ 0.69
CASC4-209ENST00000559222 CACNA1HO95180 2353 aa19.34■□□□□ 0.69
CASC4-209ENST00000559222 WASH3PC4AMC7 463 aa19.33■□□□□ 0.68
CASC4-209ENST00000559222 LUC7L3O95232 432 aaKnown RBP19.33■□□□□ 0.68
CASC4-209ENST00000559222 GFPT1Q06210 699 aaPredicted RBP19.33■□□□□ 0.68
CASC4-209ENST00000559222 SRSF5Q13243 272 aaKnown RBP19.33■□□□□ 0.68
CASC4-209ENST00000559222 ASTE1Q2TB18 679 aaPredicted RBP19.33■□□□□ 0.68
CASC4-209ENST00000559222 CHST9Q7L1S5 443 aa19.33■□□□□ 0.68
CASC4-209ENST00000559222 SYT13Q7L8C5 426 aa19.33■□□□□ 0.68
CASC4-209ENST00000559222 KIAA0907Q7Z7F0 614 aaPredicted RBP19.33■□□□□ 0.68
CASC4-209ENST00000559222 ADIPOR2Q86V24 386 aa19.33■□□□□ 0.68
CASC4-209ENST00000559222 MFN1Q8IWA4 741 aa19.33■□□□□ 0.68
CASC4-209ENST00000559222 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.33■□□□□ 0.68
CASC4-209ENST00000559222 OR8K1Q8NGG5 319 aa19.33■□□□□ 0.68
CASC4-209ENST00000559222 VCPIP1Q96JH7 1222 aa19.33■□□□□ 0.68
CASC4-209ENST00000559222 PACSIN1Q9BY11 444 aa19.33■□□□□ 0.68
CASC4-209ENST00000559222 SLC2A11Q9BYW1 496 aa19.33■□□□□ 0.68
CASC4-209ENST00000559222 THAP2Q9H0W7 228 aa19.33■□□□□ 0.68
CASC4-209ENST00000559222 CACNA2D2Q9NY47 1150 aa19.33■□□□□ 0.68
CASC4-209ENST00000559222 SLC12A6Q9UHW9 1150 aa19.33■□□□□ 0.68
CASC4-209ENST00000559222 STARD13Q9Y3M8 1113 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms