RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 GGT7Q9UJ14 662 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 TRDMT1O14717 391 aaKnown RBP11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 RPSAP08865 295 aaKnown RBP11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 VAV1P15498 845 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 RAG1P15918 1043 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 PTPN7P35236 360 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 CLNS1AP54105 237 aaKnown RBP11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 PCSK7Q16549 785 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 IGDCC3Q8IVU1 814 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 NUP93Q8N1F7 819 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 TMEM169Q96HH4 297 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 FCRL2Q96LA5 508 aaPredicted RBP11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 TTC25Q96NG3 672 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 IQCGQ9H095 443 aaKnown RBP11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 CYP4F11Q9HBI6 524 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 PHF24Q9UPV7 400 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 CASP8AP2Q9UKL3 1982 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 CFAP69A5D8W1 941 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 PAGE1O75459 146 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 FAM155BO75949 473 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 F9P00740 461 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 CCR1P32246 355 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 TUBP50607 506 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 BMPR2Q13873 1038 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 IKBKEQ14164 716 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 BTG3Q14201 252 aaPredicted RBP11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 TCTN1Q2MV58 587 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 CD300LGQ6UXG3 332 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 RNF19BQ6ZMZ0 732 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 CROCCP2Q86T23 111 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 NLRP14Q86W24 1093 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 CIR1Q86X95 450 aaPredicted RBP11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 NPAS4Q8IUM7 802 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 CCDC63Q8NA47 563 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 PAFAH2Q99487 392 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 TRABDQ9H4I3 376 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 USP29Q9HBJ7 922 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 TXNDC16Q9P2K2 825 aa11.13□□□□□ -0.63
CSPG4P5-201ENST00000558731 M0QZQ0 153 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 YWHAQP27348 245 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 ETFBP38117 255 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 SARNPP82979 210 aaKnown RBP11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 KBTBD12Q3ZCT8 623 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 OTUD1Q5VV17 481 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 SLC9A4Q6AI14 798 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 NAT8LQ8N9F0 302 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 CCT8L2Q96SF2 557 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 TRPC7Q9HCX4 862 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 ABCC13Q9NSE7 274 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 SAMD15Q9P1V8 674 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 A0A1W2PPM1 405 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 I6L893 689 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 APOEP02649 317 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 SLC4A1P02730 911 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 EZRP15311 586 aaKnown RBP11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 HHATQ5VTY9 493 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 NUGGCQ68CJ6 796 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 MPP5Q8N3R9 675 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 XPO6Q96QU8 1125 aaKnown RBP11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 TTPALQ9BTX7 342 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 SLC13A1Q9BZW2 595 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 FBXW11Q9UKB1 542 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 WDR27A2RRH5 827 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 BHMG1C9JSJ3 638 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 GOLGA8TH3BQL2 631 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 PRRG1O14668 218 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 GALTP07902 379 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 KRT4P19013 534 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 ABCG1P45844 678 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 PLEKHG4Q58EX7 1191 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 FAM26DQ5JW98 314 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 SWT1Q5T5J6 900 aaKnown RBP11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 RAP1GAP2Q684P5 730 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 FAM171BQ6P995 826 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 TRAF7Q6Q0C0 670 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 UNC5BQ8IZJ1 945 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 ATPAF2Q8N5M1 289 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 NPWQ8N729 165 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 RPRD1AQ96P16 312 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 YME1L1Q96TA2 773 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 ELAC2Q9BQ52 826 aaKnown RBP11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 FRMD8P1Q9BZ68 369 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 CYLDQ9NQC7 956 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 SLC17A6Q9P2U8 582 aa11.12□□□□□ -0.63
CSPG4P5-201ENST00000558731 ADAM12O43184 909 aa11.11□□□□□ -0.63
CSPG4P5-201ENST00000558731 PMPCBO75439 489 aa11.11□□□□□ -0.63
CSPG4P5-201ENST00000558731 CSF2RAP15509 400 aa11.11□□□□□ -0.63
CSPG4P5-201ENST00000558731 MGAT1P26572 445 aa11.11□□□□□ -0.63
CSPG4P5-201ENST00000558731 ELF1P32519 619 aa11.11□□□□□ -0.63
CSPG4P5-201ENST00000558731 CHSY1Q86X52 802 aa11.11□□□□□ -0.63
CSPG4P5-201ENST00000558731 IPMKQ8NFU5 416 aa11.11□□□□□ -0.63
CSPG4P5-201ENST00000558731 CENPIQ92674 756 aaPredicted RBP11.11□□□□□ -0.63
CSPG4P5-201ENST00000558731 PGM2Q96G03 612 aa11.11□□□□□ -0.63
CSPG4P5-201ENST00000558731 SLC2A13Q96QE2 648 aa11.11□□□□□ -0.63
CSPG4P5-201ENST00000558731 SPON2Q9BUD6 331 aa11.11□□□□□ -0.63
CSPG4P5-201ENST00000558731 WDR6Q9NNW5 1121 aaKnown RBP11.11□□□□□ -0.63
CSPG4P5-201ENST00000558731 DONSONQ9NYP3 566 aa11.11□□□□□ -0.63
CSPG4P5-201ENST00000558731 GMNCA6NCL1 334 aa11.11□□□□□ -0.63
CSPG4P5-201ENST00000558731 ARHGAP42A6NI28 874 aa11.11□□□□□ -0.63
CSPG4P5-201ENST00000558731 HHLA1C9JL84 531 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms