RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 PRRG1O14668 218 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 CHADO15335 359 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 MTSS1O43312 755 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 RIPK2O43353 540 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 RNF40O75150 1001 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 MAP3K6O95382 1288 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 MYZAPP0CAP1 466 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 CTSAP10619 480 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 MAGEA6P43360 314 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 PPP3CCP48454 512 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 MLLT6P55198 1093 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-233ENST00000557529 ARL4CP56559 192 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 COG7P83436 770 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 CBX1P83916 185 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 ZNF844Q08AG5 666 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 PLD1Q13393 1074 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 MANEALQ5VSG8 457 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 RWDD4Q6NW29 188 aaKnown RBP12.86□□□□□ -0.35
SHMT2-233ENST00000557529 CENPUQ71F23 418 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 HERC6Q8IVU3 1022 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 LZTR1Q8N653 840 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 SP7Q8TDD2 431 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-233ENST00000557529 TRMT2BQ96GJ1 504 aaKnown RBP12.86□□□□□ -0.35
SHMT2-233ENST00000557529 ZNF512Q96ME7 567 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-233ENST00000557529 TTC25Q96NG3 672 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 ZBP1Q9H171 429 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 EPB41L4BQ9H329 900 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 CDC42EP4Q9H3Q1 356 aaKnown RBP12.86□□□□□ -0.35
SHMT2-233ENST00000557529 PRDM12Q9H4Q4 367 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 DONSONQ9NYP3 566 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 HBS1LQ9Y450 684 aaKnown RBP12.86□□□□□ -0.35
SHMT2-233ENST00000557529 SNX10Q9Y5X0 201 aa12.86□□□□□ -0.35
SHMT2-233ENST00000557529 A0A0A0MRY4 1105 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 SLC12A8A0AV02 714 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 TLR5O60602 858 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 OPHN1O60890 802 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 LILRB3O75022 631 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 TTC4O95801 387 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 IGLV3-27P01718 113 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 LINC00271P0C7V0 271 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 SRGAP2BP0DMP2 458 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 DNAJB2P25686 324 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 TUBP50607 506 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 EPHB3P54753 998 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 ZNF33AQ06730 810 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 GALNT2Q10471 571 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 AP1B1Q10567 949 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 SLC29A2Q14542 456 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 KCNJ11Q14654 390 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 HIF1AQ16665 826 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 NUGGCQ68CJ6 796 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 KLHDC10Q6PID8 442 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 ARHGEF18Q6ZSZ5 1173 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 B4GALNT4Q76KP1 1039 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 CCNYQ8ND76 341 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 BTN2A3PQ96KV6 586 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 SPATA13Q96N96 652 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 HTATIP2Q9BUP3 242 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 TMEM109Q9BVC6 243 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 SAYSD1Q9NPB0 183 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 RAB6BQ9NRW1 208 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 TRPM5Q9NZQ8 1165 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 CXXC1Q9P0U4 656 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-233ENST00000557529 UXTQ9UBK9 157 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-233ENST00000557529 XPO7Q9UIA9 1087 aaKnown RBP12.85□□□□□ -0.35
SHMT2-233ENST00000557529 DNMT3LQ9UJW3 386 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 RWDD3Q9Y3V2 267 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 HS3ST4Q9Y661 456 aa12.85□□□□□ -0.35
SHMT2-233ENST00000557529 ZNF840PA6NDX5 716 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 WASH4PA8MWX3 477 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 E9PAM4 449 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 POLR3GO15318 223 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-233ENST00000557529 TEX28O15482 410 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 TBX18O95935 607 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 MOCS2O96007 188 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-233ENST00000557529 ATP2A2P16615 1042 aaKnown RBP12.84□□□□□ -0.35
SHMT2-233ENST00000557529 HMGA1P17096 107 aaKnown RBP12.84□□□□□ -0.35
SHMT2-233ENST00000557529 ATP5C1P36542 298 aaKnown RBP12.84□□□□□ -0.35
SHMT2-233ENST00000557529 FDFT1P37268 417 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 MAGEA4P43358 317 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 PPIDQ08752 370 aaKnown RBP12.84□□□□□ -0.35
SHMT2-233ENST00000557529 CBLBQ13191 982 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 HECTD3Q5T447 861 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 LRRC31Q6UY01 552 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 ITIH5Q86UX2 942 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 MIB1Q86YT6 1006 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 PDIK1LQ8N165 341 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 NPWQ8N729 165 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 KLHL23Q8NBE8 558 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 CCDC110Q8TBZ0 833 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 AUTS2Q8WXX7 1259 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 EXOC4Q96A65 974 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 HDAC11Q96DB2 347 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 P2RY11Q96G91 374 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 LGMNQ99538 433 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 NACA2Q9H009 215 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 CCSER2Q9H7U1 834 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 TMBIM4Q9HC24 238 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 NINJ2Q9NZG7 142 aa12.84□□□□□ -0.35
SHMT2-233ENST00000557529 PPARGC1AQ9UBK2 798 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms