RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 CORO1AP31146 461 aaKnown RBP13.09□□□□□ -0.31
PSEN1-220ENST00000557037 TOB1P50616 345 aaPredicted RBP13.09□□□□□ -0.31
PSEN1-220ENST00000557037 IRX6P78412 446 aaPredicted RBP13.09□□□□□ -0.31
PSEN1-220ENST00000557037 SFSWAPQ12872 951 aaKnown RBP13.09□□□□□ -0.31
PSEN1-220ENST00000557037 POM121L1PQ3SYA9 428 aa13.09□□□□□ -0.31
PSEN1-220ENST00000557037 NAPEPLDQ6IQ20 393 aa13.09□□□□□ -0.31
PSEN1-220ENST00000557037 CRTC1Q6UUV9 634 aa13.09□□□□□ -0.31
PSEN1-220ENST00000557037 VASH2Q86V25 355 aa13.09□□□□□ -0.31
PSEN1-220ENST00000557037 ZMIZ2Q8NF64 920 aa13.09□□□□□ -0.31
PSEN1-220ENST00000557037 SMARCD1Q96GM5 515 aa13.09□□□□□ -0.31
PSEN1-220ENST00000557037 SMOQ99835 787 aa13.09□□□□□ -0.31
PSEN1-220ENST00000557037 PCIF1Q9H4Z3 704 aa13.09□□□□□ -0.31
PSEN1-220ENST00000557037 AGO1Q9UL18 857 aaKnown RBP13.09□□□□□ -0.31
PSEN1-220ENST00000557037 ZNF510Q9Y2H8 683 aa13.09□□□□□ -0.31
PSEN1-220ENST00000557037 U3KQA8 63 aa13.09□□□□□ -0.31
PSEN1-220ENST00000557037 CRYBG3Q68DQ2 2970 aa13.08□□□□□ -0.31
PSEN1-220ENST00000557037 CPED1A4D0V7 1026 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 RTN2O75298 545 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 PRPF6O94906 941 aaKnown RBP13.08□□□□□ -0.32
PSEN1-220ENST00000557037 GIMD1P0DJR0 217 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 HLA-FP30511 346 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 MAT2AP31153 395 aaKnown RBP13.08□□□□□ -0.32
PSEN1-220ENST00000557037 SLC5A2P31639 672 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 ABCD1P33897 745 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 CASRP41180 1078 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 TNNC1P63316 161 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 MCM6Q14566 821 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 CST6Q15828 149 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 DYMQ7RTS9 669 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 GPRIN1Q7Z2K8 1008 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 ADIPOR2Q86V24 386 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 JAMLQ86YT9 394 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 DENND1CQ8IV53 801 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 MMAAQ8IVH4 418 aaKnown RBP13.08□□□□□ -0.32
PSEN1-220ENST00000557037 OR14C36Q8NHC7 312 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 WDR36Q8NI36 951 aaKnown RBP13.08□□□□□ -0.32
PSEN1-220ENST00000557037 C8orf76Q96K31 380 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 CBWD1Q9BRT8 395 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 SLC2A11Q9BYW1 496 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 FBXO44Q9H4M3 255 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 ABCB8Q9NUT2 735 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.08□□□□□ -0.32
PSEN1-220ENST00000557037 SUN2Q9UH99 717 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 SCML1Q9UN30 329 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 PCDHGA4Q9Y5G9 962 aa13.08□□□□□ -0.32
PSEN1-220ENST00000557037 COL27A1Q8IZC6 1860 aaPredicted RBP13.08□□□□□ -0.32
PSEN1-220ENST00000557037 TBC1D3DA0A087WVF3 549 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 TBC1D3IA0A087WXS9 549 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 TBC1D3EA0A087X179 549 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 TBC1D3KA0A087X1G2 549 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 TBC1D3FA6NER0 549 aaPredicted RBP13.07□□□□□ -0.32
PSEN1-220ENST00000557037 C10orf142B7Z368 130 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 TBC1D3LB9A6J9 549 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 CASC3O15234 703 aaKnown RBP13.07□□□□□ -0.32
PSEN1-220ENST00000557037 LZTS3O60299 673 aaPredicted RBP13.07□□□□□ -0.32
PSEN1-220ENST00000557037 RNASEH1O60930 286 aaKnown RBP13.07□□□□□ -0.32
PSEN1-220ENST00000557037 SIN3BO75182 1162 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 TBC1D3HP0C7X1 549 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 WT1P19544 449 aaPredicted RBP13.07□□□□□ -0.32
PSEN1-220ENST00000557037 PRPHP41219 470 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 ADPRHP54922 357 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 MAP3K7CLP57077 242 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 DUOXA2Q1HG44 320 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 WDR72Q3MJ13 1102 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 MBLAC2Q68D91 279 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 ZNF787Q6DD87 383 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 TBC1D3GQ6DHY5 549 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 TBC1D3CQ6IPX1 549 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 RBM44Q6ZP01 1051 aaKnown RBP13.07□□□□□ -0.32
PSEN1-220ENST00000557037 ZNF720Q7Z2F6 126 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 C14orf80Q86SX3 495 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 SFR1Q86XK3 245 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 TBC1D3Q8IZP1 549 aaPredicted RBP13.07□□□□□ -0.32
PSEN1-220ENST00000557037 FUKQ8N0W3 1084 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 WFIKKN2Q8TEU8 576 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 HTR3CQ8WXA8 447 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 FUCA2Q9BTY2 467 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 ST6GALNAC4Q9H4F1 302 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 RASAL2Q9UJF2 1139 aa13.07□□□□□ -0.32
PSEN1-220ENST00000557037 MED13Q9UHV7 2174 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 MAGEC1O60732 1142 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 LDHAP00338 332 aaKnown RBP13.06□□□□□ -0.32
PSEN1-220ENST00000557037 CST3P01034 146 aaPredicted RBP13.06□□□□□ -0.32
PSEN1-220ENST00000557037 ITGA2BP08514 1039 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 DLDP09622 509 aaKnown RBP13.06□□□□□ -0.32
PSEN1-220ENST00000557037 ALPPL2P10696 532 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 CCDC130P13994 396 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 HOXD9P28356 352 aaPredicted RBP13.06□□□□□ -0.32
PSEN1-220ENST00000557037 SLC8A1P32418 973 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 PSMD8P48556 350 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 EFEMP1Q12805 493 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 STAT4Q14765 748 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 CDKN3Q16667 212 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 MANEAQ5SRI9 462 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 KLHDC10Q6PID8 442 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 EFL1Q7Z2Z2 1120 aaKnown RBP13.06□□□□□ -0.32
PSEN1-220ENST00000557037 PRPF39Q86UA1 669 aaKnown RBP13.06□□□□□ -0.32
PSEN1-220ENST00000557037 IQCHQ86VS3 1027 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 AADATQ8N5Z0 425 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 KCTD17Q8N5Z5 321 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms