RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 TPI1P60174 286 aa25■■□□□ 1.59
TMEM260-207ENST00000555497 GRIK3Q13003 919 aa25■■□□□ 1.59
TMEM260-207ENST00000555497 TUSC3Q13454 348 aa25■■□□□ 1.59
TMEM260-207ENST00000555497 ITGA7Q13683 1181 aa25■■□□□ 1.59
TMEM260-207ENST00000555497 PM20D1Q6GTS8 502 aa25■■□□□ 1.59
TMEM260-207ENST00000555497 CDHR3Q6ZTQ4 885 aa25■■□□□ 1.59
TMEM260-207ENST00000555497 METTL23Q86XA0 190 aa25■■□□□ 1.59
TMEM260-207ENST00000555497 PTPRDP23468 1912 aa24.99■■□□□ 1.59
TMEM260-207ENST00000555497 B4GALT3O60512 393 aa24.99■■□□□ 1.59
TMEM260-207ENST00000555497 DHRS4L1P0CG22 281 aa24.99■■□□□ 1.59
TMEM260-207ENST00000555497 CST5P28325 142 aaPredicted RBP24.99■■□□□ 1.59
TMEM260-207ENST00000555497 BMPR2Q13873 1038 aa24.99■■□□□ 1.59
TMEM260-207ENST00000555497 SEPT7Q16181 437 aaKnown RBP24.99■■□□□ 1.59
TMEM260-207ENST00000555497 BSPRYQ5W0U4 402 aa24.99■■□□□ 1.59
TMEM260-207ENST00000555497 ZNF598Q86UK7 904 aaKnown RBP24.99■■□□□ 1.59
TMEM260-207ENST00000555497 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.99■■□□□ 1.59
TMEM260-207ENST00000555497 NLRC5Q86WI3 1866 aa24.99■■□□□ 1.59
TMEM260-207ENST00000555497 HMX2A2RU54 273 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 PPP1R12AO14974 1030 aaPredicted RBP24.98■■□□□ 1.59
TMEM260-207ENST00000555497 SNRPAP09012 282 aaKnown RBP24.98■■□□□ 1.59
TMEM260-207ENST00000555497 ALADP13716 330 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 CXCR3P49682 368 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 CDK16Q00536 496 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 LRRC8BQ6P9F7 803 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 SCAMP5Q8TAC9 235 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 STAMBPL1Q96FJ0 436 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 FAM111AQ96PZ2 611 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 PLCD4Q9BRC7 762 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 RXFP1Q9HBX9 757 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 MOCS1Q9NZB8 636 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 COL4A4P53420 1690 aaPredicted RBP24.98■■□□□ 1.59
TMEM260-207ENST00000555497 STK10O94804 968 aaKnown RBP24.98■■□□□ 1.59
TMEM260-207ENST00000555497 BNIP1Q12981 228 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 OLIG2Q13516 323 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 PARP6Q2NL67 630 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 FAM26DQ5JW98 314 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 ICE2Q659A1 982 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 PAXIP1Q6ZW49 1069 aaPredicted RBP24.98■■□□□ 1.59
TMEM260-207ENST00000555497 TAC4Q86UU9 113 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 DEPDC1BQ8WUY9 529 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 ARNTL2Q8WYA1 636 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 PGBD4Q96DM1 585 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 GORASP1Q9BQQ3 440 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 TKTL2Q9H0I9 626 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 VPS11Q9H270 941 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 WDCPQ9H6R7 721 aa24.98■■□□□ 1.59
TMEM260-207ENST00000555497 CASP8AP2Q9UKL3 1982 aa24.97■■□□□ 1.59
TMEM260-207ENST00000555497 RFPL1O75677 317 aa24.97■■□□□ 1.59
TMEM260-207ENST00000555497 MLNP12872 115 aa24.97■■□□□ 1.59
TMEM260-207ENST00000555497 MGAT1P26572 445 aa24.97■■□□□ 1.59
TMEM260-207ENST00000555497 HCAR3P49019 387 aa24.97■■□□□ 1.59
TMEM260-207ENST00000555497 SESN2P58004 480 aaPredicted RBP24.97■■□□□ 1.59
TMEM260-207ENST00000555497 NCALDP61601 193 aa24.97■■□□□ 1.59
TMEM260-207ENST00000555497 OVOS1Q6IE37 1185 aa24.97■■□□□ 1.59
TMEM260-207ENST00000555497 RTN4RL1Q86UN2 441 aaPredicted RBP24.97■■□□□ 1.59
TMEM260-207ENST00000555497 EIF2B3Q9NR50 452 aaKnown RBP24.97■■□□□ 1.59
TMEM260-207ENST00000555497 NOD1Q9Y239 953 aa24.97■■□□□ 1.59
TMEM260-207ENST00000555497 TTC3P53804 2025 aa24.97■■□□□ 1.59
TMEM260-207ENST00000555497 KRT37O76014 449 aa24.97■■□□□ 1.59
TMEM260-207ENST00000555497 SARNPP82979 210 aaKnown RBP24.97■■□□□ 1.59
TMEM260-207ENST00000555497 STEAP4Q687X5 459 aa24.97■■□□□ 1.59
TMEM260-207ENST00000555497 PID1Q7Z2X4 250 aa24.97■■□□□ 1.59
TMEM260-207ENST00000555497 DMAP1Q9NPF5 467 aaPredicted RBP24.97■■□□□ 1.59
TMEM260-207ENST00000555497 SLC17A6Q9P2U8 582 aa24.97■■□□□ 1.59
TMEM260-207ENST00000555497 SHROOM3Q8TF72 1996 aa24.96■■□□□ 1.59
TMEM260-207ENST00000555497 THSD7BQ9C0I4 1608 aa24.96■■□□□ 1.59
TMEM260-207ENST00000555497 PTPN3P26045 913 aa24.96■■□□□ 1.59
TMEM260-207ENST00000555497 C10orf82Q8WW14 230 aa24.96■■□□□ 1.59
TMEM260-207ENST00000555497 IRGQQ8WZA9 623 aa24.96■■□□□ 1.59
TMEM260-207ENST00000555497 RRN3Q9NYV6 651 aa24.96■■□□□ 1.59
TMEM260-207ENST00000555497 OR12D3Q9UGF7 316 aa24.96■■□□□ 1.59
TMEM260-207ENST00000555497 SDR42E2A6NKP2 422 aa24.96■■□□□ 1.59
TMEM260-207ENST00000555497 F9P00740 461 aa24.96■■□□□ 1.59
TMEM260-207ENST00000555497 PGFP49763 221 aa24.96■■□□□ 1.59
TMEM260-207ENST00000555497 CASC4Q6P4E1 433 aa24.96■■□□□ 1.59
TMEM260-207ENST00000555497 SUSD3Q96L08 255 aa24.96■■□□□ 1.59
TMEM260-207ENST00000555497 PGLYRP2Q96PD5 576 aa24.96■■□□□ 1.59
TMEM260-207ENST00000555497 SRPK1Q96SB4 655 aaKnown RBP24.96■■□□□ 1.59
TMEM260-207ENST00000555497 MANSC1Q9H8J5 431 aa24.96■■□□□ 1.59
TMEM260-207ENST00000555497 ECT2Q9H8V3 914 aa24.96■■□□□ 1.59
TMEM260-207ENST00000555497 IGSF9Q9P2J2 1179 aa24.96■■□□□ 1.59
TMEM260-207ENST00000555497 ARL13BQ3SXY8 428 aa24.95■■□□□ 1.58
TMEM260-207ENST00000555497 PCSK9Q8NBP7 692 aaKnown RBP24.95■■□□□ 1.58
TMEM260-207ENST00000555497 DQX1Q8TE96 717 aaKnown RBP24.95■■□□□ 1.58
TMEM260-207ENST00000555497 DSEQ9UL01 958 aa24.95■■□□□ 1.58
TMEM260-207ENST00000555497 LRIG2O94898 1065 aa24.94■■□□□ 1.58
TMEM260-207ENST00000555497 IFRD2Q12894 506 aaPredicted RBP24.94■■□□□ 1.58
TMEM260-207ENST00000555497 DCLRE1AQ6PJP8 1040 aa24.94■■□□□ 1.58
TMEM260-207ENST00000555497 ZNF280BQ86YH2 543 aa24.94■■□□□ 1.58
TMEM260-207ENST00000555497 KLC4Q9NSK0 619 aa24.94■■□□□ 1.58
TMEM260-207ENST00000555497 SYBUQ9NX95 663 aa24.94■■□□□ 1.58
TMEM260-207ENST00000555497 CHKBQ9Y259 395 aa24.94■■□□□ 1.58
TMEM260-207ENST00000555497 COPEO14579 308 aa24.94■■□□□ 1.58
TMEM260-207ENST00000555497 ALDH1A2O94788 518 aa24.94■■□□□ 1.58
TMEM260-207ENST00000555497 ACLYP53396 1101 aa24.94■■□□□ 1.58
TMEM260-207ENST00000555497 PPIDQ08752 370 aaKnown RBP24.94■■□□□ 1.58
TMEM260-207ENST00000555497 PLEKHG4Q58EX7 1191 aa24.94■■□□□ 1.58
TMEM260-207ENST00000555497 MROH9Q5TGP6 573 aa24.94■■□□□ 1.58
TMEM260-207ENST00000555497 GBP7Q8N8V2 638 aaPredicted RBP24.94■■□□□ 1.58
TMEM260-207ENST00000555497 SMC1BQ8NDV3 1235 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms