RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 RAB41Q5JT25 222 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 PRSS36Q5K4E3 855 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 PIGWQ7Z7B1 504 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 EXOC3L1Q86VI1 746 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 NUP93Q8N1F7 819 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 MDM1Q8TC05 714 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 TRMT2BQ96GJ1 504 aaKnown RBP17.98■□□□□ 0.47
SHOX-204ENST00000554971 CEP295NLQ96MC4 621 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 TTLL2Q9BWV7 592 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 HEMGNQ9BXL5 484 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 PHACTR1Q9C0D0 580 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 PIDD1Q9HB75 910 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 GOLGA6L7A0A1B0GV03 622 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 FAM92AA1XBS5 289 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 CDH16O75309 829 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 SETSIPP0DME0 302 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 SSR1P43307 286 aaKnown RBP17.98■□□□□ 0.47
SHOX-204ENST00000554971 KCNQ1P51787 676 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 CBX2Q14781 532 aaPredicted RBP17.98■□□□□ 0.47
SHOX-204ENST00000554971 VEPH1Q14D04 833 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 ACAP1Q15027 740 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 TFDP3Q5H9I0 405 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 ATAT1Q5SQI0 421 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 RNF187Q5TA31 235 aaPredicted RBP17.98■□□□□ 0.47
SHOX-204ENST00000554971 IZUMO3Q5VZ72 239 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 ITIH5Q86UX2 942 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 CNPY4Q8N129 248 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 ELMOD1Q8N336 334 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 CCDC197Q8NCU1 140 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 ITFG1Q8TB96 612 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 ARHGEF2Q92974 986 aaKnown RBP17.98■□□□□ 0.47
SHOX-204ENST00000554971 NKD2Q969F2 451 aaPredicted RBP17.98■□□□□ 0.47
SHOX-204ENST00000554971 ASAH2Q9NR71 780 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 THEGQ9P2T0 379 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 TJP2Q9UDY2 1190 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 USTQ9Y2C2 406 aa17.98■□□□□ 0.47
SHOX-204ENST00000554971 CUL9Q8IWT3 2517 aa17.97■□□□□ 0.47
SHOX-204ENST00000554971 GJA1P17302 382 aa17.97■□□□□ 0.47
SHOX-204ENST00000554971 CHKAP35790 457 aa17.97■□□□□ 0.47
SHOX-204ENST00000554971 RPL34P49207 117 aaKnown RBP17.97■□□□□ 0.47
SHOX-204ENST00000554971 RGS7P49802 495 aa17.97■□□□□ 0.47
SHOX-204ENST00000554971 IFRD2Q12894 506 aaPredicted RBP17.97■□□□□ 0.47
SHOX-204ENST00000554971 C2CD6Q53TS8 623 aa17.97■□□□□ 0.47
SHOX-204ENST00000554971 SPOCD1Q6ZMY3 1216 aa17.97■□□□□ 0.47
SHOX-204ENST00000554971 GSTA5Q7RTV2 222 aa17.97■□□□□ 0.47
SHOX-204ENST00000554971 PHLDB2Q86SQ0 1253 aa17.97■□□□□ 0.47
SHOX-204ENST00000554971 PACS2Q86VP3 889 aa17.97■□□□□ 0.47
SHOX-204ENST00000554971 TTC13Q8NBP0 860 aa17.97■□□□□ 0.47
SHOX-204ENST00000554971 NINJ2Q9NZG7 142 aa17.97■□□□□ 0.47
SHOX-204ENST00000554971 USP3Q9Y6I4 520 aa17.97■□□□□ 0.47
SHOX-204ENST00000554971 CLUHO75153 1309 aa17.97■□□□□ 0.47
SHOX-204ENST00000554971 SIGLEC16A6NMB1 481 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 PIK3R2O00459 728 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 ACSL3O95573 720 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 F11P03951 625 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 KRT1P04264 644 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 ITGAVP06756 1048 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 KRT7P08729 469 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 RDXP35241 583 aaKnown RBP17.96■□□□□ 0.47
SHOX-204ENST00000554971 RPL7AP62424 266 aaKnown RBP17.96■□□□□ 0.47
SHOX-204ENST00000554971 SMAD2Q15796 467 aaKnown RBP17.96■□□□□ 0.47
SHOX-204ENST00000554971 QPCTQ16769 361 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 ANKS1BQ7Z6G8 1248 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 PCGF5Q86SE9 256 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 ALLCQ8N6M5 410 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 CFAP57Q96MR6 1250 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 SAMD15Q9P1V8 674 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 A0A1W2PRU2 124 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 SMAPO00193 183 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 DNALI1O14645 258 aaPredicted RBP17.96■□□□□ 0.47
SHOX-204ENST00000554971 IL9P15248 144 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 GABRR2P28476 465 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 MORF4L2Q15014 288 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 KYNUQ16719 465 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 HADHQ16836 314 aaKnown RBP17.96■□□□□ 0.47
SHOX-204ENST00000554971 KCTD19Q17RG1 926 aaPredicted RBP17.96■□□□□ 0.47
SHOX-204ENST00000554971 STXBP5Q5T5C0 1151 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 PTCRAQ6ISU1 281 aaPredicted RBP17.96■□□□□ 0.47
SHOX-204ENST00000554971 BHLHA9Q7RTU4 235 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 SHKBP1Q8TBC3 707 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 KCTD13Q8WZ19 329 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 CPXM1Q96SM3 734 aa17.96■□□□□ 0.47
SHOX-204ENST00000554971 DDX23Q9BUQ8 820 aaKnown RBP17.96■□□□□ 0.47
SHOX-204ENST00000554971 hCG_1818297A0A087WSY0 165 aa17.95■□□□□ 0.46
SHOX-204ENST00000554971 SMIM23A6NLE4 172 aa17.95■□□□□ 0.46
SHOX-204ENST00000554971 H0YHG0 523 aa17.95■□□□□ 0.46
SHOX-204ENST00000554971 MYL4P12829 197 aa17.95■□□□□ 0.46
SHOX-204ENST00000554971 MTHFRP42898 656 aa17.95■□□□□ 0.46
SHOX-204ENST00000554971 SLCO1A2P46721 670 aa17.95■□□□□ 0.46
SHOX-204ENST00000554971 SLC8A3P57103 927 aa17.95■□□□□ 0.46
SHOX-204ENST00000554971 ADIGQ0VDE8 80 aa17.95■□□□□ 0.46
SHOX-204ENST00000554971 TAF10Q12962 218 aa17.95■□□□□ 0.46
SHOX-204ENST00000554971 ZNF268Q14587 947 aaPredicted RBP17.95■□□□□ 0.46
SHOX-204ENST00000554971 RASA2Q15283 850 aa17.95■□□□□ 0.46
SHOX-204ENST00000554971 PDZD4Q76G19 769 aaPredicted RBP17.95■□□□□ 0.46
SHOX-204ENST00000554971 TDRPQ86YL5 185 aa17.95■□□□□ 0.46
SHOX-204ENST00000554971 NDRG1Q92597 394 aaKnown RBP17.95■□□□□ 0.46
SHOX-204ENST00000554971 RIPOR3Q96MK2 946 aa17.95■□□□□ 0.46
SHOX-204ENST00000554971 MCEEQ96PE7 176 aa17.95■□□□□ 0.46
SHOX-204ENST00000554971 PLCD4Q9BRC7 762 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms