RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 KAT6AQ92794 2004 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 SPTBN2O15020 2390 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 UBA6A0AVT1 1052 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-228ENST00000554592 ARL5CA6NH57 179 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 CCL16O15467 120 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 AKAP10O43572 662 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 H2AFYO75367 372 aaKnown RBP5.36□□□□□ -1.55
ATXN3-228ENST00000554592 CYP7B1O75881 506 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 STBD1O95210 358 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 RPL17P18621 184 aaKnown RBP5.36□□□□□ -1.55
ATXN3-228ENST00000554592 NTHL1P78549 312 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 PCBP2Q15366 365 aaKnown RBP eCLIP5.36□□□□□ -1.55
ATXN3-228ENST00000554592 FUT10Q6P4F1 479 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 PGM2L1Q6PCE3 622 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-228ENST00000554592 ZBTB46Q86UZ6 589 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 SGMS1Q86VZ5 419 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 LONP2Q86WA8 852 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 CXorf67Q86X51 503 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-228ENST00000554592 RAB11FIP4Q86YS3 637 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 PHYKPLQ8IUZ5 450 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 RDM1Q8NG50 284 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 ELSPBP1Q96BH3 223 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 FAXDC2Q96IV6 333 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 B3GALT6Q96L58 329 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 NLRP4Q96MN2 994 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 TEKT3Q9BXF9 490 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 POFUT1Q9H488 388 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 L2HGDHQ9H9P8 463 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 C6orf50Q9HD87 102 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 HEBP1Q9NRV9 189 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 MIOSQ9NXC5 875 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 USP36Q9P275 1121 aaKnown RBP5.36□□□□□ -1.55
ATXN3-228ENST00000554592 ARHGAP28Q9P2N2 729 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 DNMT3BQ9UBC3 853 aaKnown RBP5.36□□□□□ -1.55
ATXN3-228ENST00000554592 FBXW11Q9UKB1 542 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 ADAM28Q9UKQ2 775 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 GIT1Q9Y2X7 761 aa5.36□□□□□ -1.55
ATXN3-228ENST00000554592 FNDC1Q4ZHG4 1894 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-228ENST00000554592 DMXL1Q9Y485 3027 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 KIAA1671Q9BY89 1806 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 ESYT2A0FGR8 921 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 TMEM8BA6NDV4 472 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 SHISA7A6NL88 538 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 F8W810 466 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 MSH4O15457 936 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 ASAP2O43150 1006 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 CHMP2AO43633 222 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 KCNK5O95279 499 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 PLATP00750 562 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 PRLP01236 227 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 CLEC2LP0C7M8 214 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 ZNF806P0C7X5 589 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 RBP3P10745 1247 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 CHMLP26374 656 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 GNA11P29992 359 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 AXLP30530 894 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 SCNN1GP51170 649 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 PLP2Q04941 152 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 MYBPC3Q14896 1274 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 UGCGQ16739 394 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 AASDHQ4L235 1098 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-228ENST00000554592 PABPC1LQ4VXU2 614 aaKnown RBP5.35□□□□□ -1.55
ATXN3-228ENST00000554592 TTC38Q5R3I4 469 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 STPG1Q5TH74 334 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 TANGO2Q6ICL3 276 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 PDXDC1Q6P996 788 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 TRMT10BQ6PF06 316 aaKnown RBP5.35□□□□□ -1.55
ATXN3-228ENST00000554592 PRSS55Q6UWB4 352 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-228ENST00000554592 LRSAM1Q6UWE0 723 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 UNQ6494/PRO21346Q6UXR6 183 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 MIER3Q7Z3K6 550 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 MICU3Q86XE3 530 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 HACE1Q8IYU2 909 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 LGI4Q8N135 537 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 SPEM1Q8N4L4 309 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 KLHL36Q8N4N3 616 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 EXOC6Q8TAG9 804 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 LNX1Q8TBB1 728 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-228ENST00000554592 CCDC12Q8WUD4 166 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-228ENST00000554592 PRPF31Q8WWY3 499 aaKnown RBP5.35□□□□□ -1.55
ATXN3-228ENST00000554592 FAM3CQ92520 227 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 LENG9Q96B70 501 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 CCDC51Q96ER9 411 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 MCRS1Q96EZ8 462 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 LOXL4Q96JB6 756 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 TUBGCP5Q96RT8 1024 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 FOXB1Q99853 325 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 CLSTN3Q9BQT9 956 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 TTPALQ9BTX7 342 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 TRMT61BQ9BVS5 477 aaKnown RBP5.35□□□□□ -1.55
ATXN3-228ENST00000554592 LSM14BQ9BX40 385 aaKnown RBP5.35□□□□□ -1.55
ATXN3-228ENST00000554592 PLA2G2FQ9BZM2 168 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 SLC13A1Q9BZW2 595 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 ZMYND12Q9H0C1 365 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 TMEM168Q9H0V1 697 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 UNC45AQ9H3U1 944 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 BRD9Q9H8M2 597 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 TRPV5Q9NQA5 729 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 ZFP69BQ9UJL9 534 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms