RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 DDIT3P35638 169 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 MLLT3P42568 568 aaPredicted RBP12.3□□□□□ -0.44
SNRPF-205ENST00000553192 ADPRHP54922 357 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 C1QBPQ07021 282 aaKnown RBP12.3□□□□□ -0.44
SNRPF-205ENST00000553192 MCM6Q14566 821 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 CST6Q15828 149 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 CHST9Q7L1S5 443 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 SCD5Q86SK9 330 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 IQCHQ86VS3 1027 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 FAM217AQ8IXS0 508 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 CPXM2Q8N436 756 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 ARL14Q8N4G2 192 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 IFI44Q8TCB0 444 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 DDI1Q8WTU0 396 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 ARRDC3Q96B67 414 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 GRAMD1AQ96CP6 724 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 HVCN1Q96D96 273 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 SMARCD1Q96GM5 515 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 MED10Q9BTT4 135 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 FBXO44Q9H4M3 255 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 CSNK1G1Q9HCP0 422 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.3□□□□□ -0.44
SNRPF-205ENST00000553192 KRT82Q9NSB4 513 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 FZD4Q9ULV1 537 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 NOL7Q9UMY1 257 aaKnown RBP12.3□□□□□ -0.44
SNRPF-205ENST00000553192 SCML2Q9UQR0 700 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 PLAAQ9Y263 795 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 CA5BQ9Y2D0 317 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 ZNF510Q9Y2H8 683 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 PCDHGA4Q9Y5G9 962 aa12.3□□□□□ -0.44
SNRPF-205ENST00000553192 VWA3AA6NCI4 1184 aa12.29□□□□□ -0.44
SNRPF-205ENST00000553192 HHLA1C9JL84 531 aa12.29□□□□□ -0.44
SNRPF-205ENST00000553192 EPB41L2O43491 1005 aaKnown RBP12.29□□□□□ -0.44
SNRPF-205ENST00000553192 SIN3BO75182 1162 aa12.29□□□□□ -0.44
SNRPF-205ENST00000553192 RNASEH2AO75792 299 aaKnown RBP12.29□□□□□ -0.44
SNRPF-205ENST00000553192 LDHAP00338 332 aaKnown RBP12.29□□□□□ -0.44
SNRPF-205ENST00000553192 CYBBP04839 570 aa12.29□□□□□ -0.44
SNRPF-205ENST00000553192 HMBSP08397 361 aa12.29□□□□□ -0.44
SNRPF-205ENST00000553192 ITGA2BP08514 1039 aa12.29□□□□□ -0.44
SNRPF-205ENST00000553192 DLDP09622 509 aaKnown RBP12.29□□□□□ -0.44
SNRPF-205ENST00000553192 GARTP22102 1010 aa12.29□□□□□ -0.44
SNRPF-205ENST00000553192 PDX1P52945 283 aa12.29□□□□□ -0.44
SNRPF-205ENST00000553192 PDE4CQ08493 712 aa12.29□□□□□ -0.44
SNRPF-205ENST00000553192 NCAPHQ15003 741 aa12.29□□□□□ -0.44
SNRPF-205ENST00000553192 C10orf120Q5SQS8 335 aa12.29□□□□□ -0.44
SNRPF-205ENST00000553192 TRAPPC11Q7Z392 1133 aa12.29□□□□□ -0.44
SNRPF-205ENST00000553192 SFR1Q86XK3 245 aa12.29□□□□□ -0.44
SNRPF-205ENST00000553192 DENND1CQ8IV53 801 aa12.29□□□□□ -0.44
SNRPF-205ENST00000553192 AADATQ8N5Z0 425 aa12.29□□□□□ -0.44
SNRPF-205ENST00000553192 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.29□□□□□ -0.44
SNRPF-205ENST00000553192 WDR36Q8NI36 951 aaKnown RBP12.29□□□□□ -0.44
SNRPF-205ENST00000553192 WFIKKN2Q8TEU8 576 aa12.29□□□□□ -0.44
SNRPF-205ENST00000553192 CDK5RAP3Q96JB5 506 aa12.29□□□□□ -0.44
SNRPF-205ENST00000553192 C8orf76Q96K31 380 aa12.29□□□□□ -0.44
SNRPF-205ENST00000553192 PCIF1Q9H4Z3 704 aa12.29□□□□□ -0.44
SNRPF-205ENST00000553192 SUN2Q9UH99 717 aa12.29□□□□□ -0.44
SNRPF-205ENST00000553192 R3HCC1Q9Y3T6 440 aaKnown RBP12.29□□□□□ -0.44
SNRPF-205ENST00000553192 KIF26BQ2KJY2 2108 aa12.28□□□□□ -0.44
SNRPF-205ENST00000553192 TBCAO75347 108 aaKnown RBP12.28□□□□□ -0.44
SNRPF-205ENST00000553192 PIAS2O75928 621 aa12.28□□□□□ -0.44
SNRPF-205ENST00000553192 TNNC2P02585 160 aa12.28□□□□□ -0.44
SNRPF-205ENST00000553192 SLC5A2P31639 672 aa12.28□□□□□ -0.44
SNRPF-205ENST00000553192 HARS2P49590 506 aaKnown RBP12.28□□□□□ -0.44
SNRPF-205ENST00000553192 MAP3K7CLP57077 242 aa12.28□□□□□ -0.44
SNRPF-205ENST00000553192 OVGP1Q12889 678 aa12.28□□□□□ -0.44
SNRPF-205ENST00000553192 DUOXA2Q1HG44 320 aa12.28□□□□□ -0.44
SNRPF-205ENST00000553192 WDR72Q3MJ13 1102 aa12.28□□□□□ -0.44
SNRPF-205ENST00000553192 MBLAC2Q68D91 279 aa12.28□□□□□ -0.44
SNRPF-205ENST00000553192 FBXO18Q8NFZ0 1043 aa12.28□□□□□ -0.44
SNRPF-205ENST00000553192 ABCB8Q9NUT2 735 aa12.28□□□□□ -0.44
SNRPF-205ENST00000553192 ACSL6Q9UKU0 697 aa12.28□□□□□ -0.44
SNRPF-205ENST00000553192 PCDHGA7Q9Y5G6 932 aa12.28□□□□□ -0.44
SNRPF-205ENST00000553192 ATP8B3O60423 1300 aa12.28□□□□□ -0.44
SNRPF-205ENST00000553192 CENPEQ02224 2701 aa12.28□□□□□ -0.44
SNRPF-205ENST00000553192 CSMD1Q96PZ7 3565 aa12.28□□□□□ -0.44
SNRPF-205ENST00000553192 POLQO75417 2590 aa12.27□□□□□ -0.44
SNRPF-205ENST00000553192 K7ESM1 405 aa12.27□□□□□ -0.45
SNRPF-205ENST00000553192 KRT18P05783 430 aaKnown RBP12.27□□□□□ -0.45
SNRPF-205ENST00000553192 PABPC1P11940 636 aaKnown RBP12.27□□□□□ -0.45
SNRPF-205ENST00000553192 CCDC130P13994 396 aa12.27□□□□□ -0.45
SNRPF-205ENST00000553192 SLC8A1P32418 973 aa12.27□□□□□ -0.45
SNRPF-205ENST00000553192 CASP5P51878 434 aa12.27□□□□□ -0.45
SNRPF-205ENST00000553192 MORC3Q14149 939 aa12.27□□□□□ -0.45
SNRPF-205ENST00000553192 HS1BP3Q53T59 392 aa12.27□□□□□ -0.45
SNRPF-205ENST00000553192 C9orf64Q5T6V5 341 aa12.27□□□□□ -0.45
SNRPF-205ENST00000553192 L1TD1Q5T7N2 865 aaKnown RBP12.27□□□□□ -0.45
SNRPF-205ENST00000553192 GUSBP11Q6P575 273 aa12.27□□□□□ -0.45
SNRPF-205ENST00000553192 CRTC1Q6UUV9 634 aa12.27□□□□□ -0.45
SNRPF-205ENST00000553192 RBM44Q6ZP01 1051 aaKnown RBP12.27□□□□□ -0.45
SNRPF-205ENST00000553192 CBWD2Q8IUF1 395 aa12.27□□□□□ -0.45
SNRPF-205ENST00000553192 MMAAQ8IVH4 418 aaKnown RBP12.27□□□□□ -0.45
SNRPF-205ENST00000553192 ZNF276Q8N554 614 aa12.27□□□□□ -0.45
SNRPF-205ENST00000553192 OR14C36Q8NHC7 312 aa12.27□□□□□ -0.45
SNRPF-205ENST00000553192 WFDC5Q8TCV5 224 aa12.27□□□□□ -0.45
SNRPF-205ENST00000553192 NOC3LQ8WTT2 800 aaKnown RBP12.27□□□□□ -0.45
SNRPF-205ENST00000553192 OMDQ99983 421 aa12.27□□□□□ -0.45
SNRPF-205ENST00000553192 DCLK3Q9C098 648 aa12.27□□□□□ -0.45
SNRPF-205ENST00000553192 XYLT2Q9H1B5 865 aa12.27□□□□□ -0.45
SNRPF-205ENST00000553192 ADNPQ9H2P0 1102 aa12.27□□□□□ -0.45
SNRPF-205ENST00000553192 KLHL11Q9NVR0 708 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms