RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 SNNO75324 88 aaPredicted RBP7.56□□□□□ -1.2
BEST3-212ENST00000553096 SNAI1O95863 264 aaPredicted RBP7.56□□□□□ -1.2
BEST3-212ENST00000553096 NFICP08651 508 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 CNTFP26441 200 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 HOXD12P35452 270 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 ADCYAP1R1P41586 468 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 GDF10P55107 478 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 OXCT1P55809 520 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 YWHAEP62258 255 aaKnown RBP7.56□□□□□ -1.2
BEST3-212ENST00000553096 DYNLT1P63172 113 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 IGBP1P78318 339 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 ROR1Q01973 937 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 OGDHQ02218 1023 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 SLC25A11Q02978 314 aaKnown RBP7.56□□□□□ -1.2
BEST3-212ENST00000553096 STX3Q13277 289 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 TTLL4Q14679 1199 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 TMEM259Q4ZIN3 620 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 TEX44Q53QW1 395 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 HSP90AA5PQ58FG0 334 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 FAM47CQ5HY64 1035 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 C4orf22Q6V702 233 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 OSTM1Q86WC4 334 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 RFX6Q8HWS3 928 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 ZBTB8OSQ8IWT0 167 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 ALDH16A1Q8IZ83 802 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 C2orf69Q8N8R5 385 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 CPB2Q96IY4 423 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 MAELQ96JY0 434 aaKnown RBP7.56□□□□□ -1.2
BEST3-212ENST00000553096 C16orf70Q9BSU1 422 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 SMARCAD1Q9H4L7 1026 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 RSAD1Q9HA92 442 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 PREBQ9HCU5 417 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 CISHQ9NSE2 258 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 PTTG2Q9NZH5 202 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 PAK5Q9P286 719 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 TJP2Q9UDY2 1190 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 CYTH4Q9UIA0 394 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 GMEB1Q9Y692 573 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 BRCA2P51587 3418 aa7.56□□□□□ -1.2
BEST3-212ENST00000553096 ARHGAP42A6NI28 874 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 HBP1O60381 514 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 RNASEH1O60930 286 aaKnown RBP7.55□□□□□ -1.2
BEST3-212ENST00000553096 AOC2O75106 756 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 TMCC1O94876 653 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 INSRRP14616 1297 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 PRKCHP24723 683 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 CHN2P52757 468 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 COPAP53621 1224 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 ALDH18A1P54886 795 aaKnown RBP7.55□□□□□ -1.2
BEST3-212ENST00000553096 GAD2Q05329 585 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 TFDP2Q14188 446 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 KCNJ11Q14654 390 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 SPATA24Q86W54 205 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 CTAGE3PQ8IX95 158 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 BRI3BPQ8WY22 251 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 HIC2Q96JB3 615 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 DDX50Q9BQ39 737 aaKnown RBP7.55□□□□□ -1.2
BEST3-212ENST00000553096 EBF3Q9H4W6 596 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 PDZD7Q9H5P4 517 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 PLK2Q9NYY3 685 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 HMGXB4Q9UGU5 601 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 PPM1HQ9ULR3 514 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 PAIP2BQ9ULR5 123 aaKnown RBP7.55□□□□□ -1.2
BEST3-212ENST00000553096 TLL2Q9Y6L7 1015 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 A0A088AWK7 358 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 C2orf71A6NGG8 1288 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 SDR42E2A6NKP2 422 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 E5RJQ4 531 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 INO80B-WBP1J3KQ70 363 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 CASQ2O14958 399 aaPredicted RBP7.55□□□□□ -1.2
BEST3-212ENST00000553096 MED7O43513 233 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 VTNP04004 478 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 BPGMP07738 259 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 RBP3P10745 1247 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 VAV1P15498 845 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 CRHR1P34998 444 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 TFAMQ00059 246 aaKnown RBP7.55□□□□□ -1.2
BEST3-212ENST00000553096 ORC1Q13415 861 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 CAMK2BQ13554 666 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 MMEL1Q495T6 779 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 ANKRD20A4Q4UJ75 823 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 PABPC1LQ4VXU2 614 aaKnown RBP7.55□□□□□ -1.2
BEST3-212ENST00000553096 MARCH8Q5T0T0 291 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 TXNRD3NBQ6F5E7 133 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 RFX8Q6ZV50 586 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 RAPH1Q70E73 1250 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 UNC45BQ8IWX7 931 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 CCDC33Q8N5R6 958 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 PPM1NQ8N819 430 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 KIAA1958Q8N8K9 716 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 C1orf127Q8N9H9 656 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 FAM71DQ8N9W8 422 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 ZBTB8BQ8NAP8 495 aaPredicted RBP7.55□□□□□ -1.2
BEST3-212ENST00000553096 KCTD6Q8NC69 237 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 ICA1LQ8NDH6 482 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 CATSPER1Q8NEC5 780 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 PPP1R14CQ8TAE6 165 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 PPP1R13LQ8WUF5 828 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 AFG1LQ8WV93 481 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 FAF2Q96CS3 445 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms