RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 SKOR2Q2VWA4 1001 aaPredicted RBP17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 C2CD6Q53TS8 623 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 RAP1GAP2Q684P5 730 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 MMS22LQ6ZRQ5 1243 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 KIAA2013Q8IYS2 634 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 LGI2Q8N0V4 545 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 PGBD3Q8N328 593 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 OLIG1Q8TAK6 271 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 WFDC5Q8TCV5 224 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 LOXL4Q96JB6 756 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 ZC3H10Q96K80 434 aaKnown RBP17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 CBX8Q9HC52 389 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 THAP10Q9P2Z0 257 aaPredicted RBP17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 DOCK4Q8N1I0 1966 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 A0A1B0GTH6 734 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 SERPINC1P01008 464 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 CCDC172P0C7W6 258 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 GABRG2P18507 467 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 MMP8P22894 467 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 SULT1E1P49888 294 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 ENPP2Q13822 863 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 ZNF234Q14588 700 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 ZSCAN23Q3MJ62 389 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 PLK5Q496M5 336 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 TTC39BQ5VTQ0 682 aaPredicted RBP17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 OTUD1Q5VV17 481 aaPredicted RBP17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 TMEM215Q68D42 235 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 KIAA1211LQ6NV74 962 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 SERPINA13PQ6UXR4 307 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 SND1Q7KZF4 910 aaKnown RBP eCLIP17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 CHST9Q7L1S5 443 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 LUZP1Q86V48 1076 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 MYEOVQ96EZ4 313 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 NPY6RQ99463 290 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 CD248Q9HCU0 757 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 TMEM51Q9NW97 253 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 MYO6Q9UM54 1294 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 PAXBP1Q9Y5B6 917 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 RAD54BQ9Y620 910 aa17.84■□□□□ 0.45
CHMP1A-208ENST00000550102 A0A1W2PQC6 194 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 DCLK1O15075 740 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 RHOBTB1O94844 696 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 EPN2O95208 641 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 LUC7L3O95232 432 aaKnown RBP17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 FERP16591 822 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 NDUFV2P19404 249 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 P2RY2P41231 377 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 IL12RB1P42701 662 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 NSFP46459 744 aaKnown RBP17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 CENPCQ03188 943 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 BYSLQ13895 437 aaKnown RBP17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 CLEC16AQ2KHT3 1053 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 SLC25A52Q3SY17 297 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 FNDC3BQ53EP0 1204 aaKnown RBP17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 BRMS1LQ5PSV4 323 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 RABGAP1LQ5R372 815 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 KIAA0907Q7Z7F0 614 aaPredicted RBP17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 CFAP52Q8N1V2 620 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 CARNMT1Q8N4J0 409 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 FIBINQ8TAL6 211 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 SORCS1Q8WY21 1168 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 NT5C3BQ969T7 300 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 PGAP3Q96FM1 320 aaPredicted RBP17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 C11orf70Q9BRQ4 267 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 DUSP15Q9H1R2 295 aaPredicted RBP17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 METTL5Q9NRN9 209 aaKnown RBP17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 PIGVQ9NUD9 493 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 SEPT11Q9NVA2 429 aaKnown RBP17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 CALCOCO1Q9P1Z2 691 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 USP18Q9UMW8 372 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 INVSQ9Y283 1065 aa17.83■□□□□ 0.44
CHMP1A-208ENST00000550102 WASH3PC4AMC7 463 aa17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 SYNCRIPO60506 623 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 F9P00740 461 aa17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 ATP5BP06576 529 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 TFE3P19532 575 aaPredicted RBP17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 PRKCHP24723 683 aa17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 CD70P32970 193 aa17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 FLT3P36888 993 aa17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 DEUP1Q05D60 604 aa17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 SPEM2Q0P670 501 aa17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 FUT11Q495W5 492 aa17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 MBLAC2Q68D91 279 aa17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 ARCQ7LC44 396 aa17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 ADIPOR2Q86V24 386 aa17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 SLC30A5Q8TAD4 765 aa17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 BAP1Q92560 729 aa17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 ERLEC1Q96DZ1 483 aa17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 TBCBQ99426 244 aa17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 PRMT1Q99873 361 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 PARD6AQ9NPB6 346 aa17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 TMEM59LQ9UK28 342 aa17.82■□□□□ 0.44
CHMP1A-208ENST00000550102 A0A1B0GVM2 712 aa17.81■□□□□ 0.44
CHMP1A-208ENST00000550102 TCAF2A6NFQ2 919 aa17.81■□□□□ 0.44
CHMP1A-208ENST00000550102 H0Y626 953 aa17.81■□□□□ 0.44
CHMP1A-208ENST00000550102 GOLGA6L19H0YKK7 550 aa17.81■□□□□ 0.44
CHMP1A-208ENST00000550102 DLDP09622 509 aaKnown RBP17.81■□□□□ 0.44
CHMP1A-208ENST00000550102 UNGP13051 313 aaPredicted RBP17.81■□□□□ 0.44
CHMP1A-208ENST00000550102 POLR2EP19388 210 aaKnown RBP17.81■□□□□ 0.44
CHMP1A-208ENST00000550102 BCKDHBP21953 392 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms