RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 ATP5BP06576 529 aaKnown RBP12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 CD27P26842 260 aa12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 SLC6A4P31645 630 aa12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 GTF2H1P32780 548 aa12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 CCT8P50990 548 aa12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 BCAT1P54687 386 aa12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 C21orf59P57076 290 aa12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 BST2Q10589 180 aaKnown RBP12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 NFIL3Q16649 462 aa12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 CBWD6Q4V339 395 aa12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 CBWD3Q5JTY5 395 aa12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 CBWD5Q5RIA9 395 aa12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 ZNF776Q68DI1 518 aaPredicted RBP12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 DHX40Q8IX18 779 aaKnown RBP12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 GALNT15Q8N3T1 639 aa12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 CLEC4CQ8WTT0 213 aa12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 SLC6A18Q96N87 628 aa12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 NEUROG2Q9H2A3 272 aa12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 ABCC13Q9NSE7 274 aa12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 FBXL12Q9NXK8 326 aa12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 CELSR3Q9NYQ7 3312 aa12.44□□□□□ -0.42
TRAFD1-205ENST00000548277 A0A1W2PP55 124 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 CETN3O15182 167 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 SIN3BO75182 1162 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 MYL1P05976 194 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 DLDP09622 509 aaKnown RBP12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 EPB41P11171 864 aaKnown RBP12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 GRK6P43250 576 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 GRIA4P48058 902 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 ST8SIA6P61647 398 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 DNAJC3Q13217 504 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 TTC31Q49AM3 519 aaPredicted RBP12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 PIK3R6Q5UE93 754 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 KIAA0895LQ68EN5 471 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 NCEH1Q6PIU2 408 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 KRBA2Q6ZNG9 492 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 MMS22LQ6ZRQ5 1243 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 MFN1Q8IWA4 741 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 CFAP52Q8N1V2 620 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 GUF1Q8N442 669 aaKnown RBP12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 CARNMT1Q8N4J0 409 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 TTC39CQ8N584 583 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 PIP4K2CQ8TBX8 421 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 IGSF8Q969P0 613 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 MYEOVQ96EZ4 313 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 PCED1AQ9H1Q7 454 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 EBF2Q9HAK2 575 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 SGK2Q9HBY8 427 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 AASDHPPTQ9NRN7 309 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 FTSJ1Q9UET6 329 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 SERGEFQ9UGK8 458 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 ARID1BQ8NFD5 2236 aaPredicted RBP12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 LAMA5O15230 3695 aa12.43□□□□□ -0.42
TRAFD1-205ENST00000548277 WNT9AO14904 365 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 MID1O15344 667 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 STX10O60499 249 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 PRB1P04280 392 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 WNT1P04628 370 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 IGHV4-34P06331 123 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 ITGAVP06756 1048 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 VDRP11473 427 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 JUPP14923 745 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 CTSOP43234 321 aaPredicted RBP12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 CTSKP43235 329 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 GALCP54803 685 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 TBX4P57082 545 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 DAOAP59103 153 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 CAMK2BQ13554 666 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 CUL2Q13617 745 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 KIAA0907Q7Z7F0 614 aaPredicted RBP12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 MMAAQ8IVH4 418 aaKnown RBP12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 EID2Q8N6I1 236 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 PDCD7Q8N8D1 485 aaKnown RBP12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 ENGASEQ8NFI3 743 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 OMDQ99983 421 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 ORAI3Q9BRQ5 295 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 ACE2Q9BYF1 805 aaPredicted RBP12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 SCAND2PQ9GZW5 306 aaPredicted RBP12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 MIS12Q9H081 205 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 GOLPH3LQ9H4A5 285 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 CEP83Q9Y592 693 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 ATP6V1DQ9Y5K8 247 aa12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 ANKRD11Q6UB99 2663 aaPredicted RBP12.42□□□□□ -0.42
TRAFD1-205ENST00000548277 DSPP15924 2871 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 FAM237AA0A1B0GTK4 181 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 TTC34A8MYJ7 566 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 RNF225M0QZC1 329 aaPredicted RBP12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 ENC1O14682 589 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 PCDHGA12O60330 932 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 ACSL4O60488 711 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 RNASEH1O60930 286 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 RNASEH2AO75792 299 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 GABBR2O75899 941 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 DKK1O94907 266 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 ZNF202O95125 648 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 LDOC1O95751 146 aaPredicted RBP12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 MOCS2O96007 188 aaPredicted RBP12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 ABCB4P21439 1286 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 ITPKBP27987 946 aa12.41□□□□□ -0.42
TRAFD1-205ENST00000548277 CSKP41240 450 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms