RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 OTUD1Q5VV17 481 aaPredicted RBP13.09□□□□□ -0.31
SCAF11-209ENST00000547018 CGB2Q6NT52 195 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 GLB1LQ6UWU2 654 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 PIGWQ7Z7B1 504 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 SMARCD1Q96GM5 515 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 ZNF358Q9NW07 568 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 HAO1Q9UJM8 370 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 TET1Q8NFU7 2136 aa13.09□□□□□ -0.31
SCAF11-209ENST00000547018 ABHD2P08910 425 aa13.08□□□□□ -0.31
SCAF11-209ENST00000547018 TNFAIP8L3Q5GJ75 292 aa13.08□□□□□ -0.31
SCAF11-209ENST00000547018 CMC1Q7Z7K0 106 aa13.08□□□□□ -0.31
SCAF11-209ENST00000547018 ECHDC2Q86YB7 292 aa13.08□□□□□ -0.31
SCAF11-209ENST00000547018 ZDHHC17Q8IUH5 632 aa13.08□□□□□ -0.31
SCAF11-209ENST00000547018 IPMKQ8NFU5 416 aa13.08□□□□□ -0.31
SCAF11-209ENST00000547018 RFWD2Q8NHY2 731 aa13.08□□□□□ -0.31
SCAF11-209ENST00000547018 TEKT4Q8WW24 435 aa13.08□□□□□ -0.31
SCAF11-209ENST00000547018 SGSM3Q96HU1 749 aa13.08□□□□□ -0.31
SCAF11-209ENST00000547018 SRPK1Q96SB4 655 aaKnown RBP13.08□□□□□ -0.31
SCAF11-209ENST00000547018 SEPT5Q99719 369 aaPredicted RBP13.08□□□□□ -0.31
SCAF11-209ENST00000547018 FERMT1Q9BQL6 677 aa13.08□□□□□ -0.31
SCAF11-209ENST00000547018 ARL2BPQ9Y2Y0 163 aa13.08□□□□□ -0.31
SCAF11-209ENST00000547018 CFAP69A5D8W1 941 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 KRT37O76014 449 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 DDHD2O94830 711 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 MT-CYBP00156 380 aaPredicted RBP13.08□□□□□ -0.32
SCAF11-209ENST00000547018 KCNA4P22459 653 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 SEPT6Q14141 434 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 OTOAQ7RTW8 1153 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 DEFB128Q7Z7B8 93 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 SH3TC2Q8TF17 1288 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 STK32AQ8WU08 396 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 NPY6RQ99463 290 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 SHCBP1LQ9BZQ2 653 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 G3BP2Q9UN86 482 aaKnown RBP13.08□□□□□ -0.32
SCAF11-209ENST00000547018 A0A0A0MRY4 1105 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 DPYSL4O14531 572 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 APOEP02649 317 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 CPB1P15086 417 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 ETFBP38117 255 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 CCL23P55773 120 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 MGAT5Q09328 741 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 EFEMP1Q12805 493 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 SETDB1Q15047 1291 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 ARL13BQ3SXY8 428 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 HSP90AA5PQ58FG0 334 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 FAM171A1Q5VUB5 890 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 MTDHQ86UE4 582 aaKnown RBP13.08□□□□□ -0.32
SCAF11-209ENST00000547018 FAM136AQ96C01 138 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 MFSD3Q96ES6 412 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 SPATA13Q96N96 652 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 PPP1R12CQ9BZL4 782 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 CAB39LQ9H9S4 337 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 FBXO6Q9NRD1 293 aaPredicted RBP13.08□□□□□ -0.32
SCAF11-209ENST00000547018 ARMCX1Q9P291 453 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 SLC24A2Q9UI40 661 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 VANGL2Q9ULK5 521 aa13.08□□□□□ -0.32
SCAF11-209ENST00000547018 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.08□□□□□ -0.32
SCAF11-209ENST00000547018 GOLGA4Q13439 2230 aaKnown RBP13.08□□□□□ -0.32
SCAF11-209ENST00000547018 CHADO15335 359 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 PQBP1O60828 265 aaKnown RBP13.07□□□□□ -0.32
SCAF11-209ENST00000547018 NFKB1P19838 968 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 MAXP61244 160 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 ADGRD1Q6QNK2 874 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 STRADAQ7RTN6 431 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 TMCO2Q7Z6W1 182 aaPredicted RBP13.07□□□□□ -0.32
SCAF11-209ENST00000547018 RNF180Q86T96 592 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 SLC26A11Q86WA9 606 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 SLC25A41Q8N5S1 370 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 DQX1Q8TE96 717 aaKnown RBP13.07□□□□□ -0.32
SCAF11-209ENST00000547018 GIPC2Q8TF65 315 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 MANSC1Q9H8J5 431 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 NDFIP2Q9NV92 336 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 ZFATQ9P243 1243 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 BCLAF3A2AJT9 711 aaKnown RBP13.07□□□□□ -0.32
SCAF11-209ENST00000547018 C5orf60A6NFR6 353 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 DAB1O75553 588 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 RPL17P18621 184 aaKnown RBP13.07□□□□□ -0.32
SCAF11-209ENST00000547018 AVPR1AP37288 418 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 ACLYP53396 1101 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 SARNPP82979 210 aaKnown RBP13.07□□□□□ -0.32
SCAF11-209ENST00000547018 RCN2Q14257 317 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 POU6F1Q14863 301 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 PDK1Q15118 436 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 DLG2Q15700 870 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 MGAT5BQ3V5L5 792 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 NOMO2Q5JPE7 1267 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 CIR1Q86X95 450 aaPredicted RBP13.07□□□□□ -0.32
SCAF11-209ENST00000547018 SPATS2Q86XZ4 545 aaKnown RBP13.07□□□□□ -0.32
SCAF11-209ENST00000547018 THEM5Q8N1Q8 247 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 SPATA6LQ8N4H0 392 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 SCLYQ96I15 445 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 AGAP2Q99490 1192 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 RTP3Q9BQQ7 232 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 MYLK2Q9H1R3 596 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 STARD7Q9NQZ5 370 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 CPSF2Q9P2I0 782 aaKnown RBP13.07□□□□□ -0.32
SCAF11-209ENST00000547018 ZSWIM8A7E2V4 1837 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 EIF4E1BA6NMX2 242 aaKnown RBP13.07□□□□□ -0.32
SCAF11-209ENST00000547018 FAM155AB1AL88 458 aaPredicted RBP13.07□□□□□ -0.32
SCAF11-209ENST00000547018 DNAJC6O75061 913 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms