RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 USP17L7P0C7H9 530 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 ZSCAN5DPP0CG00 497 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 ARAFP10398 606 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 NCAM1P13591 858 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 TFE3P19532 575 aaPredicted RBP7.28□□□□□ -1.24
SPPL3-209ENST00000545209 NR1D1P20393 614 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 ATP5DP30049 168 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 CTCFP49711 727 aaPredicted RBP7.28□□□□□ -1.24
SPPL3-209ENST00000545209 NDUFV1P49821 464 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 ARL4CP56559 192 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 HTRA3P83110 453 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 NME3Q13232 169 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 XRCC4Q13426 336 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 SLC29A2Q14542 456 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 CA9Q16790 459 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 RAB6CQ53S08 254 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 RNASEH2BQ5TBB1 312 aaKnown RBP7.28□□□□□ -1.24
SPPL3-209ENST00000545209 KCTD16Q68DU8 428 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 ZNF280DQ6N043 979 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 CD300LGQ6UXG3 332 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 NPNTQ6UXI9 565 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 PDZD4Q76G19 769 aaPredicted RBP7.28□□□□□ -1.24
SPPL3-209ENST00000545209 ZNF771Q7L3S4 317 aaPredicted RBP7.28□□□□□ -1.24
SPPL3-209ENST00000545209 BEND5Q7L4P6 421 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 GPRIN1Q7Z2K8 1008 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 ZC3H18Q86VM9 953 aaKnown RBP7.28□□□□□ -1.24
SPPL3-209ENST00000545209 ZNF280BQ86YH2 543 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 NPAS4Q8IUM7 802 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 RELL1Q8IUW5 271 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 CCDC185Q8N715 623 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 PQLC3Q8N755 202 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 FAM71DQ8N9W8 422 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 ZMIZ2Q8NF64 920 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 DBF4BQ8NFT6 615 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 OR10T2Q8NGX3 314 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 PCDH19Q8TAB3 1148 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 NDRG1Q92597 394 aaKnown RBP7.28□□□□□ -1.24
SPPL3-209ENST00000545209 NTAN1Q96AB6 310 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 PGM2Q96G03 612 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 FUBP3Q96I24 572 aaKnown RBP eCLIP7.28□□□□□ -1.24
SPPL3-209ENST00000545209 CSPG4P5Q96PW8 444 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 RBM15Q96T37 977 aaKnown RBP eCLIP7.28□□□□□ -1.24
SPPL3-209ENST00000545209 KCNK16Q96T55 309 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 PKMYT1Q99640 499 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 FRMD8Q9BZ67 464 aaPredicted RBP7.28□□□□□ -1.24
SPPL3-209ENST00000545209 ROPN1BQ9BZX4 212 aaPredicted RBP7.28□□□□□ -1.24
SPPL3-209ENST00000545209 RAB6CQ9H0N0 254 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 CDC42EP4Q9H3Q1 356 aaKnown RBP7.28□□□□□ -1.24
SPPL3-209ENST00000545209 HIPK3Q9H422 1215 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 ROPN1Q9HAT0 212 aaPredicted RBP7.28□□□□□ -1.24
SPPL3-209ENST00000545209 PRDM10Q9NQV6 1147 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 DDIT4Q9NX09 232 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 COX16Q9P0S2 106 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 PAK5Q9P286 719 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 SAE1Q9UBE0 346 aaPredicted RBP7.28□□□□□ -1.24
SPPL3-209ENST00000545209 FZD10Q9ULW2 581 aa7.28□□□□□ -1.24
SPPL3-209ENST00000545209 TSC2P49815 1807 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 TLDC2A0PJX2 215 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 HACD1B0YJ81 288 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 H7C4K7 107 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 TP73O15350 636 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 KCNN4O15554 427 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 AGTP01019 485 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 ALDH2P05091 517 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 ITGB1P05556 798 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 ABHD2P08910 425 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 ETS1P14921 441 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 CAPN2P17655 700 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 IL4RP24394 825 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 RPL22P35268 128 aaKnown RBP7.27□□□□□ -1.25
SPPL3-209ENST00000545209 ADRA1BP35368 520 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 CHKAP35790 457 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 GRIK1P39086 918 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 MAGEA4P43358 317 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 ATXN1P54253 815 aaKnown RBP7.27□□□□□ -1.25
SPPL3-209ENST00000545209 CACNA2D1P54289 1103 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 BASP1P80723 227 aaKnown RBP7.27□□□□□ -1.25
SPPL3-209ENST00000545209 SCAPQ12770 1279 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 SMARCB1Q12824 385 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 SFSWAPQ12872 951 aaKnown RBP7.27□□□□□ -1.25
SPPL3-209ENST00000545209 STAT4Q14765 748 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 PDK1Q15118 436 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 OCLNQ16625 522 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 CTXN3Q4LDR2 81 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 SLC39A12Q504Y0 691 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 SLC45A4Q5BKX6 768 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 DNAJC21Q5F1R6 531 aaKnown RBP7.27□□□□□ -1.25
SPPL3-209ENST00000545209 BSPRYQ5W0U4 402 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 PM20D1Q6GTS8 502 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 VSTM1Q6UX27 236 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 KDM7AQ6ZMT4 941 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 LEKR1Q6ZMV7 388 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 HFE2Q6ZVN8 426 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 ANKRD33Q7Z3H0 272 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 BNIPLQ7Z465 357 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 PRUNE1Q86TP1 453 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 SCN4BQ8IWT1 228 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 UNC45BQ8IWX7 931 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 PDIK1LQ8N165 341 aa7.27□□□□□ -1.25
SPPL3-209ENST00000545209 LRRC43Q8N309 656 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms