RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 TBC1D31Q96DN5 1066 aa31.4■■■□□ 2.62
CCM2-219ENST00000544363 E9PAM4 449 aa31.39■■■□□ 2.62
CCM2-219ENST00000544363 EPCAMP16422 314 aa31.39■■■□□ 2.62
CCM2-219ENST00000544363 KCNQ1P51787 676 aa31.39■■■□□ 2.62
CCM2-219ENST00000544363 HLTFQ14527 1009 aaKnown RBP eCLIP31.39■■■□□ 2.62
CCM2-219ENST00000544363 MS4A13Q5J8X5 152 aa31.39■■■□□ 2.62
CCM2-219ENST00000544363 BEND6Q5SZJ8 279 aaPredicted RBP31.39■■■□□ 2.62
CCM2-219ENST00000544363 RWDD4Q6NW29 188 aaKnown RBP31.39■■■□□ 2.62
CCM2-219ENST00000544363 GAREM2Q75VX8 874 aa31.39■■■□□ 2.62
CCM2-219ENST00000544363 AENQ8WTP8 325 aaKnown RBP31.39■■■□□ 2.62
CCM2-219ENST00000544363 ARNTL2Q8WYA1 636 aa31.39■■■□□ 2.62
CCM2-219ENST00000544363 OLFM3Q96PB7 478 aa31.39■■■□□ 2.62
CCM2-219ENST00000544363 LMAN2LQ9H0V9 348 aa31.39■■■□□ 2.62
CCM2-219ENST00000544363 BCLAF3A2AJT9 711 aaKnown RBP31.38■■■□□ 2.61
CCM2-219ENST00000544363 ECHS1P30084 290 aa31.38■■■□□ 2.61
CCM2-219ENST00000544363 STIP1P31948 543 aaKnown RBP31.38■■■□□ 2.61
CCM2-219ENST00000544363 C14orf80Q86SX3 495 aa31.38■■■□□ 2.61
CCM2-219ENST00000544363 GLIS1Q8NBF1 620 aa31.38■■■□□ 2.61
CCM2-219ENST00000544363 PLD4Q96BZ4 506 aa31.38■■■□□ 2.61
CCM2-219ENST00000544363 GRHL1Q9NZI5 618 aa31.38■■■□□ 2.61
CCM2-219ENST00000544363 FGF10O15520 208 aaPredicted RBP31.38■■■□□ 2.61
CCM2-219ENST00000544363 IVDP26440 423 aa31.38■■■□□ 2.61
CCM2-219ENST00000544363 HOXA9P31269 272 aa31.38■■■□□ 2.61
CCM2-219ENST00000544363 GDF10P55107 478 aa31.38■■■□□ 2.61
CCM2-219ENST00000544363 PRUNE1Q86TP1 453 aa31.38■■■□□ 2.61
CCM2-219ENST00000544363 CDKL3Q8IVW4 592 aaPredicted RBP31.38■■■□□ 2.61
CCM2-219ENST00000544363 MRPS31Q92665 395 aaKnown RBP31.38■■■□□ 2.61
CCM2-219ENST00000544363 CORO1BQ9BR76 489 aa31.38■■■□□ 2.61
CCM2-219ENST00000544363 KLF16Q9BXK1 252 aaPredicted RBP31.38■■■□□ 2.61
CCM2-219ENST00000544363 CATSPERBQ9H7T0 1116 aa31.38■■■□□ 2.61
CCM2-219ENST00000544363 SLC28A3Q9HAS3 691 aa31.38■■■□□ 2.61
CCM2-219ENST00000544363 PCDH9Q9HC56 1237 aa31.38■■■□□ 2.61
CCM2-219ENST00000544363 TRPC7Q9HCX4 862 aa31.38■■■□□ 2.61
CCM2-219ENST00000544363 ASAH2Q9NR71 780 aa31.38■■■□□ 2.61
CCM2-219ENST00000544363 RAD54BQ9Y620 910 aa31.38■■■□□ 2.61
CCM2-219ENST00000544363 CFAP69A5D8W1 941 aa31.37■■■□□ 2.61
CCM2-219ENST00000544363 PER2O15055 1255 aa31.37■■■□□ 2.61
CCM2-219ENST00000544363 RFPL2O75678 378 aa31.37■■■□□ 2.61
CCM2-219ENST00000544363 IFNB1P01574 187 aa31.37■■■□□ 2.61
CCM2-219ENST00000544363 ETS1P14921 441 aa31.37■■■□□ 2.61
CCM2-219ENST00000544363 CDC25CP30307 473 aa31.37■■■□□ 2.61
CCM2-219ENST00000544363 BMP8BP34820 402 aa31.37■■■□□ 2.61
CCM2-219ENST00000544363 ADCY8P40145 1251 aa31.37■■■□□ 2.61
CCM2-219ENST00000544363 AUHQ13825 339 aaKnown RBP31.37■■■□□ 2.61
CCM2-219ENST00000544363 B4GALNT4Q76KP1 1039 aa31.37■■■□□ 2.61
CCM2-219ENST00000544363 FAM71DQ8N9W8 422 aa31.37■■■□□ 2.61
CCM2-219ENST00000544363 WHRNQ9P202 907 aa31.37■■■□□ 2.61
CCM2-219ENST00000544363 OBSL1O75147 1896 aa31.37■■■□□ 2.61
CCM2-219ENST00000544363 CHD7Q9P2D1 2997 aa31.37■■■□□ 2.61
CCM2-219ENST00000544363 MYO7AQ13402 2215 aa31.36■■■□□ 2.61
CCM2-219ENST00000544363 HACD1B0YJ81 288 aa31.36■■■□□ 2.61
CCM2-219ENST00000544363 SEC31AO94979 1220 aaKnown RBP31.36■■■□□ 2.61
CCM2-219ENST00000544363 SERPINB6P35237 376 aa31.36■■■□□ 2.61
CCM2-219ENST00000544363 HARS2P49590 506 aaKnown RBP31.36■■■□□ 2.61
CCM2-219ENST00000544363 VPS41P49754 854 aa31.36■■■□□ 2.61
CCM2-219ENST00000544363 SLC45A4Q5BKX6 768 aa31.36■■■□□ 2.61
CCM2-219ENST00000544363 TXNDC8Q6A555 127 aa31.36■■■□□ 2.61
CCM2-219ENST00000544363 LRRC31Q6UY01 552 aa31.36■■■□□ 2.61
CCM2-219ENST00000544363 ZNF683Q8IZ20 524 aa31.36■■■□□ 2.61
CCM2-219ENST00000544363 SNF8Q96H20 258 aa31.36■■■□□ 2.61
CCM2-219ENST00000544363 QKIQ96PU8 341 aaKnown RBP eCLIP31.36■■■□□ 2.61
CCM2-219ENST00000544363 NEUROG2Q9H2A3 272 aa31.36■■■□□ 2.61
CCM2-219ENST00000544363 USP29Q9HBJ7 922 aa31.36■■■□□ 2.61
CCM2-219ENST00000544363 DPP7Q9UHL4 492 aa31.36■■■□□ 2.61
CCM2-219ENST00000544363 CHD9Q3L8U1 2897 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 OLFM2O95897 454 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 HNRNPA1P09651 372 aaKnown RBP eCLIP31.35■■■□□ 2.61
CCM2-219ENST00000544363 ZSCAN5DPP0CG00 497 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 MBL2P11226 248 aaPredicted RBP31.35■■■□□ 2.61
CCM2-219ENST00000544363 PDK1Q15118 436 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 EMBQ6PCB8 327 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 ADGRD2Q7Z7M1 963 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 GCNAQ96QF7 691 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 PRMT1Q99873 361 aaKnown RBP31.35■■■□□ 2.61
CCM2-219ENST00000544363 GKN1Q9NS71 199 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 VANGL2Q9ULK5 521 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 STC2O76061 302 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 MYL4P12829 197 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 ITIH2P19823 946 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 RBL1P28749 1068 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 CYP4F8P98187 520 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 RAP1GAP2Q684P5 730 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 RBM23Q86U06 439 aaKnown RBP31.35■■■□□ 2.61
CCM2-219ENST00000544363 CCDC33Q8N5R6 958 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 NPWQ8N729 165 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 AZIN2Q96A70 460 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 CYP2S1Q96SQ9 504 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 ATXN3LQ9H3M9 355 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 ZDHHC18Q9NUE0 388 aa31.35■■■□□ 2.61
CCM2-219ENST00000544363 PPARGC1AQ9UBK2 798 aaKnown RBP31.35■■■□□ 2.61
CCM2-219ENST00000544363 CLUHO75153 1309 aa31.34■■■□□ 2.61
CCM2-219ENST00000544363 PTPN2P17706 415 aa31.34■■■□□ 2.61
CCM2-219ENST00000544363 HDCP19113 662 aa31.34■■■□□ 2.61
CCM2-219ENST00000544363 EPHA5P54756 1037 aa31.34■■■□□ 2.61
CCM2-219ENST00000544363 PLTPP55058 493 aa31.34■■■□□ 2.61
CCM2-219ENST00000544363 CALCOCO2Q13137 446 aa31.34■■■□□ 2.61
CCM2-219ENST00000544363 NADSYN1Q6IA69 706 aa31.34■■■□□ 2.61
CCM2-219ENST00000544363 ZDHHC24Q6UX98 284 aa31.34■■■□□ 2.61
CCM2-219ENST00000544363 ARL14EPQ8N8R7 260 aaPredicted RBP31.34■■■□□ 2.61
CCM2-219ENST00000544363 GDPD5Q8WTR4 605 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms