RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 ZNF276Q8N554 614 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 LRRC52Q8N7C0 313 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 GSTCDQ8NEC7 633 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 GAD1Q99259 594 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 FOXP3Q9BZS1 431 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 UGT1A7Q9HAW7 530 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 UGT1A10Q9HAW8 530 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 UGT1A8Q9HAW9 530 aa15.46■□□□□ 0.07
CHFR-223ENST00000544268 PAK6Q9NQU5 681 aaPredicted RBP15.46■□□□□ 0.07
CHFR-223ENST00000544268 DDX43Q9NXZ2 648 aaKnown RBP15.46■□□□□ 0.07
CHFR-223ENST00000544268 TCRBV9S1A1TA0A576 114 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 PIRO00625 290 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 MCF2LO15068 1137 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 CAPN15O75808 1086 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 CD4P01730 458 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 FAM200BP0CF97 657 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 GPD1P21695 349 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 GABRB2P47870 512 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 ZNF143P52747 638 aaPredicted RBP15.45■□□□□ 0.06
CHFR-223ENST00000544268 MBTPS1Q14703 1052 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 PDK4Q16654 411 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 PPP6R3Q5H9R7 873 aaPredicted RBP15.45■□□□□ 0.06
CHFR-223ENST00000544268 ATP11CQ8NB49 1132 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 RFWD2Q8NHY2 731 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 ZNF75CPQ92670 426 aaPredicted RBP15.45■□□□□ 0.06
CHFR-223ENST00000544268 CFAP36Q96G28 342 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 PRR11Q96HE9 360 aaPredicted RBP15.45■□□□□ 0.06
CHFR-223ENST00000544268 BARX2Q9UMQ3 279 aaPredicted RBP15.45■□□□□ 0.06
CHFR-223ENST00000544268 CXorf49A8MYA2 514 aaPredicted RBP15.45■□□□□ 0.06
CHFR-223ENST00000544268 SPTLC1O15269 473 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 KCNN4O15554 427 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 MAP3K7O43318 606 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 XPOTO43592 962 aaKnown RBP15.45■□□□□ 0.06
CHFR-223ENST00000544268 EDF1O60869 148 aaKnown RBP15.45■□□□□ 0.06
CHFR-223ENST00000544268 LYNP07948 512 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 DESP17661 470 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 RBL1P28749 1068 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 ROR1Q01973 937 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 INCA1Q0VD86 236 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 FAAP100Q0VG06 881 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 DSC3Q14574 896 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 AGMOQ6ZNB7 445 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 PQLC3Q8N755 202 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 PLD5Q8N7P1 536 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 NDRG1Q92597 394 aaKnown RBP15.45■□□□□ 0.06
CHFR-223ENST00000544268 KHSRPQ92945 711 aaKnown RBP eCLIP15.45■□□□□ 0.06
CHFR-223ENST00000544268 PPP1R10Q96QC0 940 aaKnown RBP15.45■□□□□ 0.06
CHFR-223ENST00000544268 ADAM2Q99965 735 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 CENPKQ9BS16 269 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 PHACTR1Q9C0D0 580 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 ACSS3Q9H6R3 686 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 PLAC1Q9HBJ0 212 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 USP29Q9HBJ7 922 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 SAR1AQ9NR31 198 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 RAB6BQ9NRW1 208 aa15.45■□□□□ 0.06
CHFR-223ENST00000544268 PIH1D1Q9NWS0 290 aaKnown RBP15.45■□□□□ 0.06
CHFR-223ENST00000544268 CAPN9O14815 690 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 YWHAGP61981 247 aaKnown RBP eCLIP15.44■□□□□ 0.06
CHFR-223ENST00000544268 LIN52Q52LA3 116 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 SH2D4BQ5SQS7 431 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 ADGRD1Q6QNK2 874 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 LRRC6Q86X45 466 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 ARL10Q8N8L6 244 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 RNF169Q8NCN4 708 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 CCDC110Q8TBZ0 833 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 FAM172AQ8WUF8 416 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 ZNF184Q99676 751 aaPredicted RBP15.44■□□□□ 0.06
CHFR-223ENST00000544268 WBP1LQ9NX94 342 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 MIOSQ9NXC5 875 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 KANSL3Q9P2N6 904 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 STX18Q9P2W9 335 aaKnown RBP15.44■□□□□ 0.06
CHFR-223ENST00000544268 CACNG4Q9UBN1 327 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 CIDEBQ9UHD4 219 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 E7ESA3 106 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 TOP3BO95985 862 aaKnown RBP15.44■□□□□ 0.06
CHFR-223ENST00000544268 VDRP11473 427 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 GRIA1P42261 906 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 NOMO1Q15155 1222 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 RFWD3Q6PCD5 774 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 CDHR3Q6ZTQ4 885 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 HACE1Q8IYU2 909 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 PDIK1LQ8N165 341 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 PCDH19Q8TAB3 1148 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 C10orf82Q8WW14 230 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 FAF2Q96CS3 445 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 DHRS4Q9BTZ2 278 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 RNF208Q9H0X6 261 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 ZNF212Q9UDV6 495 aa15.44■□□□□ 0.06
CHFR-223ENST00000544268 BPTFQ12830 3046 aa15.43■□□□□ 0.06
CHFR-223ENST00000544268 ARL5CA6NH57 179 aa15.43■□□□□ 0.06
CHFR-223ENST00000544268 ATP6V1G1O75348 118 aa15.43■□□□□ 0.06
CHFR-223ENST00000544268 CCDC166P0CW27 439 aa15.43■□□□□ 0.06
CHFR-223ENST00000544268 CCL5P13501 91 aa15.43■□□□□ 0.06
CHFR-223ENST00000544268 IGFBP6P24592 240 aaPredicted RBP15.43■□□□□ 0.06
CHFR-223ENST00000544268 KRT81Q14533 505 aa15.43■□□□□ 0.06
CHFR-223ENST00000544268 SOWAHAQ2M3V2 549 aa15.43■□□□□ 0.06
CHFR-223ENST00000544268 SMYD5Q6GMV2 418 aa15.43■□□□□ 0.06
CHFR-223ENST00000544268 MRPL10Q7Z7H8 261 aaKnown RBP15.43■□□□□ 0.06
CHFR-223ENST00000544268 HIC2Q96JB3 615 aa15.43■□□□□ 0.06
CHFR-223ENST00000544268 CNPY3Q9BT09 278 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms