RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 PRAMEF12O95522 483 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 PFKLP17858 780 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 ACAT1P24752 427 aaKnown RBP11.91□□□□□ -0.5
COPS7A-217ENST00000543537 CYP2F1P24903 491 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 LMO2P25791 158 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 STIP1P31948 543 aaKnown RBP11.91□□□□□ -0.5
COPS7A-217ENST00000543537 COILP38432 576 aaPredicted RBP11.91□□□□□ -0.5
COPS7A-217ENST00000543537 VSNL1P62760 191 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 GUCY2DQ02846 1103 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 CALCOCO2Q13137 446 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 SLMAPQ14BN4 828 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 SLC25A52Q3SY17 297 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 PMF1Q6P1K2 205 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 CCDC137Q6PK04 289 aaKnown RBP11.91□□□□□ -0.5
COPS7A-217ENST00000543537 PCGF5Q86SE9 256 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 MON1AQ86VX9 555 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 TTC30AQ86WT1 665 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 RALGPS2Q86X27 583 aaPredicted RBP11.91□□□□□ -0.5
COPS7A-217ENST00000543537 DNAAF5Q86Y56 855 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 KLHL7Q8IXQ5 586 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 FUKQ8N0W3 1084 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 MREGQ8N565 214 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 C12orf29Q8N999 325 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 KCTD6Q8NC69 237 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 BPIFB1Q8TDL5 484 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 GIPC2Q8TF65 315 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 RXFP2Q8WXD0 754 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 CENPIQ92674 756 aaPredicted RBP11.91□□□□□ -0.5
COPS7A-217ENST00000543537 FAM126AQ9BYI3 521 aaPredicted RBP11.91□□□□□ -0.5
COPS7A-217ENST00000543537 GOLPH3Q9H4A6 298 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 EPB41L5Q9HCM4 733 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 DMAP1Q9NPF5 467 aaPredicted RBP11.91□□□□□ -0.5
COPS7A-217ENST00000543537 MED4Q9NPJ6 270 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 CRTAC1Q9NQ79 661 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 METTL5Q9NRN9 209 aaKnown RBP11.91□□□□□ -0.5
COPS7A-217ENST00000543537 DONSONQ9NYP3 566 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 HMGXB4Q9UGU5 601 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 USP18Q9UMW8 372 aa11.91□□□□□ -0.5
COPS7A-217ENST00000543537 CFAP69A5D8W1 941 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 A6NNZ2 444 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 F8VP50 259 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 LAMTOR5O43504 91 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 HCRTO43612 131 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 OPA1O60313 960 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 LRCH4O75427 683 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 ENDOD1O94919 500 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 PAPSS2O95340 614 aaPredicted RBP11.9□□□□□ -0.5
COPS7A-217ENST00000543537 KRT1P04264 644 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 CHRNB1P11230 501 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 TCF3P15923 654 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 HTR7P34969 479 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 GPR15P49685 360 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 CYP4F8P98187 520 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 NAA30Q147X3 362 aaPredicted RBP11.9□□□□□ -0.5
COPS7A-217ENST00000543537 TAF12Q16514 161 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 TAZQ16635 292 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 DDR2Q16832 855 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 ARL13BQ3SXY8 428 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 TUBB8Q3ZCM7 444 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 DCAF12L1Q5VU92 463 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 SPOCD1Q6ZMY3 1216 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 SND1Q7KZF4 910 aaKnown RBP eCLIP11.9□□□□□ -0.5
COPS7A-217ENST00000543537 PIGZQ86VD9 579 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 SPATA2LQ8IUW3 424 aaPredicted RBP11.9□□□□□ -0.5
COPS7A-217ENST00000543537 YAF2Q8IY57 180 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 KIAA1958Q8N8K9 716 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 ZBTB44Q8NCP5 570 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 LRRN4CLQ8ND94 238 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 FAM3CQ92520 227 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 MRPS31Q92665 395 aaKnown RBP11.9□□□□□ -0.5
COPS7A-217ENST00000543537 PGAP3Q96FM1 320 aaPredicted RBP11.9□□□□□ -0.5
COPS7A-217ENST00000543537 PCED1BQ96HM7 432 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 BTBD6Q96KE9 485 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 SLITRK1Q96PX8 696 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 PNKPQ96T60 521 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 FAM83CQ9BQN1 747 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 TTLL2Q9BWV7 592 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 AP1M1Q9BXS5 423 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 FBXO44Q9H4M3 255 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 POPDC2Q9HBU9 364 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 FAM49BQ9NUQ9 324 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 TDP1Q9NUW8 608 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 WHRNQ9P202 907 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 CYTH4Q9UIA0 394 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 NME7Q9Y5B8 376 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 PCDHGA2Q9Y5H1 932 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 RAD54BQ9Y620 910 aa11.9□□□□□ -0.5
COPS7A-217ENST00000543537 PTPRDP23468 1912 aa11.9□□□□□ -0.51
COPS7A-217ENST00000543537 TICRRQ7Z2Z1 1910 aa11.9□□□□□ -0.51
COPS7A-217ENST00000543537 LRRD1A4D1F6 860 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 SLC38A8A6NNN8 435 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 BHMG1C9JSJ3 638 aaPredicted RBP11.89□□□□□ -0.51
COPS7A-217ENST00000543537 MAP2K7O14733 419 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 TRIM66O15016 1216 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 PAPSS1O43252 624 aaPredicted RBP11.89□□□□□ -0.51
COPS7A-217ENST00000543537 RAD51CO43502 376 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 LILRB5O75023 590 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 ATP2C2O75185 946 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 DAB1O75553 588 aa11.89□□□□□ -0.51
COPS7A-217ENST00000543537 AP1G2O75843 785 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms