RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	POLI	Q9UNA4	740 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	RPL26L1	Q9UNX3	145 aa	Known RBP	5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PRR5-ARHGAP8	B1AHC4	643 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ENPP3	O14638	875 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	AVIL	O75366	819 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PDE5A	O76074	875 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	FGF19	O95750	216 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TUFM	P49411	452 aa	Known RBP	5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	GLUD2	P49448	558 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SCNN1G	P51170	649 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	EPHB3	P54753	998 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	YWHAG	P61981	247 aa	Known RBP eCLIP	5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	BASP1	P80723	227 aa	Known RBP	5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ARHGAP8	P85298	464 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PEX6	Q13608	980 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PSMD6	Q15008	389 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SMAD1	Q15797	465 aa	Known RBP	5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ZNF394	Q53GI3	561 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SFT2D3	Q587I9	215 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	EFHC2	Q5JST6	749 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	B3GNT9	Q6UX72	402 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ZCCHC23	Q6ZST2	131 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	YAF2	Q8IY57	180 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ULK2	Q8IYT8	1036 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	LRRC52	Q8N7C0	313 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SLC26A7	Q8TE54	656 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	LRRN4	Q8WUT4	740 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ITFG2	Q969R8	447 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TRIM11	Q96F44	468 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SLITRK1	Q96PX8	696 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ZWILCH	Q9H900	591 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	GALNT8	Q9NY28	637 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SLC24A2	Q9UI40	661 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PACSIN3	Q9UKS6	424 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SNX9	Q9Y5X1	595 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	HNRNPCL1	O60812	293 aa	Known RBP	5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TOP3B	O95985	862 aa	Known RBP	5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PIGR	P01833	764 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MLH1	P40692	756 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	AQP5	P55064	265 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	USP46	P62068	366 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TMPRSS15	P98073	1019 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	YWHAH	Q04917	246 aa	Predicted RBP	5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PRKD1	Q15139	912 aa	Predicted RBP	5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	RALGPS1	Q5JS13	557 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CES4A	Q5XG92	561 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	KATNAL2	Q8IYT4	538 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SIX6OS1	Q8N1H7	587 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	EXD1	Q8NHP7	514 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	DCAKD	Q8WVC6	231 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PHACTR1	Q9C0D0	580 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	NIF3L1	Q9GZT8	377 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	VPS11	Q9H270	941 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CYP4F11	Q9HBI6	524 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	DDX18	Q9NVP1	670 aa	Known RBP	5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	STRIP2	Q9ULQ0	834 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SH3BP1	Q9Y3L3	701 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	IKBKG	Q9Y6K9	419 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MYH11	P35749	1972 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TMEM265	A0A087WTH1	108 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SPECC1L-ADORA2A	F8WAN1	911 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	AP2B1	P63010	937 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	DLG1	Q12959	904 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	BMPR2	Q13873	1038 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	MORF4L2	Q15014	288 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	KBTBD12	Q3ZCT8	623 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	C6orf163	Q5TEZ5	329 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	FAM171A1	Q5VUB5	890 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	OVOS1	Q6IE37	1185 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ADGRD1	Q6QNK2	874 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SPOCD1	Q6ZMY3	1216 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	MON1B	Q7L1V2	547 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TRIM74	Q86UV6	250 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TRIM73	Q86UV7	250 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SCN4B	Q8IWT1	228 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ARHGAP18	Q8N392	663 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	STKLD1	Q8NE28	680 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SPATA18	Q8TC71	538 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	RNF139	Q8WU17	664 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PPP1R13L	Q8WUF5	828 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ARNTL2	Q8WYA1	636 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CPT1B	Q92523	772 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CFAP36	Q96G28	342 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	HIC2	Q96JB3	615 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	HEXIM2	Q96MH2	286 aa	Known RBP	5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	MCEE	Q96PE7	176 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PHF12	Q96QT6	1004 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	EBF4	Q9BQW3	602 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TUBB6	Q9BUF5	446 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	FAM192A	Q9GZU8	254 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	VCX3B	Q9H321	246 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	FAM124B	Q9H5Z6	455 aa	Predicted RBP	5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	VCX3A	Q9NNX9	186 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	FOCAD	Q5VW36	1801 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	KAT6A	Q92794	2004 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	LOC285556	D6RIA3	1793 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	MYOCOS	A0A1B0GUC4	107 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SYN3	O14994	580 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PSTPIP1	O43586	416 aa		5.83	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CSDE1	O75534	798 aa	Known RBP	5.83	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms