RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ALDH1A2O94788 518 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 ZNF286BP0CG31 522 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 FDFT1P37268 417 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 BST2Q10589 180 aaKnown RBP14.98□□□□□ -0.01
CDCA3-207ENST00000538862 BLMHQ13867 455 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 KHDC1Q4VXA5 237 aaKnown RBP14.98□□□□□ -0.01
CDCA3-207ENST00000538862 TEX44Q53QW1 395 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 HEATR6Q6AI08 1181 aaKnown RBP14.98□□□□□ -0.01
CDCA3-207ENST00000538862 RFWD3Q6PCD5 774 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 RINLQ6ZS11 566 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 HACE1Q8IYU2 909 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 NDUFAF2Q8N183 169 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 ANKRD52Q8NB46 1076 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 SLC43A3Q8NBI5 491 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 SLC13A1Q9BZW2 595 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 WWP1Q9H0M0 922 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 UGT1A7Q9HAW7 530 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 UGT1A10Q9HAW8 530 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 UGT1A8Q9HAW9 530 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 MTMR10Q9NXD2 777 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 AP4E1Q9UPM8 1137 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 NME7Q9Y5B8 376 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 HMX2A2RU54 273 aa14.97□□□□□ -0.01
CDCA3-207ENST00000538862 CAPN14A8MX76 684 aa14.97□□□□□ -0.01
CDCA3-207ENST00000538862 BPGMP07738 259 aa14.97□□□□□ -0.01
CDCA3-207ENST00000538862 ATP6V1C1P21283 382 aa14.97□□□□□ -0.01
CDCA3-207ENST00000538862 ACADSBP45954 432 aa14.97□□□□□ -0.01
CDCA3-207ENST00000538862 BMPR2Q13873 1038 aa14.97□□□□□ -0.01
CDCA3-207ENST00000538862 CHI3L2Q15782 390 aa14.97□□□□□ -0.01
CDCA3-207ENST00000538862 STEAP4Q687X5 459 aa14.97□□□□□ -0.01
CDCA3-207ENST00000538862 TRMT10BQ6PF06 316 aaKnown RBP14.97□□□□□ -0.01
CDCA3-207ENST00000538862 DSTYKQ6XUX3 929 aa14.97□□□□□ -0.01
CDCA3-207ENST00000538862 KYAT3Q6YP21 454 aaKnown RBP14.97□□□□□ -0.01
CDCA3-207ENST00000538862 CRLF3Q8IUI8 442 aa14.97□□□□□ -0.01
CDCA3-207ENST00000538862 MPP5Q8N3R9 675 aa14.97□□□□□ -0.01
CDCA3-207ENST00000538862 BEST2Q8NFU1 509 aa14.97□□□□□ -0.01
CDCA3-207ENST00000538862 ACMSDQ8TDX5 336 aa14.97□□□□□ -0.01
CDCA3-207ENST00000538862 PRR11Q96HE9 360 aaPredicted RBP14.97□□□□□ -0.01
CDCA3-207ENST00000538862 SNX27Q96L92 541 aa14.97□□□□□ -0.01
CDCA3-207ENST00000538862 CSPG4P5Q96PW8 444 aa14.97□□□□□ -0.01
CDCA3-207ENST00000538862 SIKE1Q9BRV8 207 aa14.97□□□□□ -0.01
CDCA3-207ENST00000538862 MECRQ9BV79 373 aa14.97□□□□□ -0.01
CDCA3-207ENST00000538862 PPP1R12CQ9BZL4 782 aa14.97□□□□□ -0.01
CDCA3-207ENST00000538862 NMUR2Q9GZQ4 415 aa14.97□□□□□ -0.01
CDCA3-207ENST00000538862 TRMT13Q9NUP7 481 aaKnown RBP14.97□□□□□ -0.01
CDCA3-207ENST00000538862 RCOR3Q9P2K3 495 aaPredicted RBP14.97□□□□□ -0.01
CDCA3-207ENST00000538862 SUFUQ9UMX1 484 aa14.97□□□□□ -0.01
CDCA3-207ENST00000538862 A8MXQ7 604 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 H0Y3Z8 333 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 H3BRB1 525 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 KIAA0355O15063 1070 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 MAGEC1O60732 1142 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 DGKIO75912 1065 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 NPTXRO95502 500 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 RAG1P15918 1043 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 TFE3P19532 575 aaPredicted RBP14.96□□□□□ -0.01
CDCA3-207ENST00000538862 BCAT1P54687 386 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 TBCCQ15814 346 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 TSNAXIP1Q2TAA8 658 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 HSF5Q4G112 596 aaPredicted RBP14.96□□□□□ -0.01
CDCA3-207ENST00000538862 FAM182AQ5T1J6 154 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 STRADAQ7RTN6 431 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 TMPRSS6Q8IU80 811 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 CCNJLQ8IV13 435 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 KIRREL3Q8IZU9 778 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 CRYBG2Q8N1P7 616 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 STKLD1Q8NE28 680 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 OR6B3Q8NGW1 331 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 DEPDC1BQ8WUY9 529 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 HTR3CQ8WXA8 447 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 ZMAT2Q96NC0 199 aaKnown RBP14.96□□□□□ -0.01
CDCA3-207ENST00000538862 KCTD15Q96SI1 283 aaPredicted RBP14.96□□□□□ -0.01
CDCA3-207ENST00000538862 TUT1Q9H6E5 874 aaKnown RBP14.96□□□□□ -0.01
CDCA3-207ENST00000538862 PCMTD2Q9NV79 361 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 TBX21Q9UL17 535 aa14.96□□□□□ -0.01
CDCA3-207ENST00000538862 TRIP12Q14669 1992 aaPredicted RBP14.96□□□□□ -0.02
CDCA3-207ENST00000538862 A0A0A0MRY4 1105 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 PPEF2O14830 753 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 PPP1R12AO14974 1030 aaPredicted RBP14.96□□□□□ -0.02
CDCA3-207ENST00000538862 CD4P01730 458 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 ACADSP16219 412 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 VHLP40337 213 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 RAP1GDS1P52306 607 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 CDC42EP1Q00587 391 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 WASHC5Q12768 1159 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 GRIK4Q16099 956 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 DGKDQ16760 1214 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 SOWAHAQ2M3V2 549 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 MARCH8Q5T0T0 291 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 MROH9Q5TGP6 573 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 NCBP2-AS2Q69YL0 99 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 MARK2Q7KZI7 788 aaKnown RBP14.96□□□□□ -0.02
CDCA3-207ENST00000538862 TTC7BQ86TV6 843 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 PSTKQ8IV42 348 aaKnown RBP14.96□□□□□ -0.02
CDCA3-207ENST00000538862 ARID3BQ8IVW6 561 aaPredicted RBP14.96□□□□□ -0.02
CDCA3-207ENST00000538862 TFB1MQ8WVM0 346 aaKnown RBP14.96□□□□□ -0.02
CDCA3-207ENST00000538862 HSFY1Q96LI6 401 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 SPATA13Q96N96 652 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 OLFM3Q96PB7 478 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 DNAI2Q9GZS0 605 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms