RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 COLGALT1Q8NBJ5 622 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 FBF1Q8TES7 1133 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 ATXN2LQ8WWM7 1075 aaKnown RBP13.79□□□□□ -0.2
BEST1-208ENST00000534553 ALKBH8Q96BT7 664 aaKnown RBP13.79□□□□□ -0.2
BEST1-208ENST00000534553 PPP1R2P1Q96PQ5 205 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 SMC6Q96SB8 1091 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 LGMNQ99538 433 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 FAM107BQ9H098 131 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 PPANQ9NQ55 473 aaKnown RBP13.79□□□□□ -0.2
BEST1-208ENST00000534553 CTNNAL1Q9UBT7 734 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 GGA2Q9UJY4 613 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 CHMP2BQ9UQN3 213 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 TLR6Q9Y2C9 796 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.78□□□□□ -0.2
BEST1-208ENST00000534553 TBKBP1A7MCY6 615 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 FAM72CH0Y354 149 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 AP3B1O00203 1094 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 PRPF4O43172 522 aaKnown RBP eCLIP13.78□□□□□ -0.2
BEST1-208ENST00000534553 KRT15P19012 456 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 GCAP28676 217 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 SSTR1P30872 391 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 GAD2Q05329 585 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 IKBKEQ14164 716 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 MTFR1Q15390 333 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 FAM72AQ5TYM5 149 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 FAM72DQ6L9T8 149 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 CNKSR3Q6P9H4 555 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 MICALCLQ6ZW33 695 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 SCD5Q86SK9 330 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 FAM72BQ86X60 149 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 TAB3Q8N5C8 712 aaPredicted RBP13.78□□□□□ -0.2
BEST1-208ENST00000534553 CHMP6Q96FZ7 201 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 C1orf74Q96LT6 269 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 CCT8L2Q96SF2 557 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 WDR83Q9BRX9 315 aaKnown RBP13.78□□□□□ -0.2
BEST1-208ENST00000534553 TTPALQ9BTX7 342 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 GPR62Q9BZJ7 368 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 CRISPLD2Q9H0B8 497 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 NSRP1Q9H0G5 558 aaKnown RBP13.78□□□□□ -0.2
BEST1-208ENST00000534553 ANLNQ9NQW6 1124 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 TMPRSS4Q9NRS4 437 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 TBK1Q9UHD2 729 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 TTC3P53804 2025 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 IQANK1A0A1B0GTG1 560 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 I6L893 689 aaPredicted RBP13.78□□□□□ -0.2
BEST1-208ENST00000534553 TBC1D4O60343 1298 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 CPP00450 1065 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 YWHAQP27348 245 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 GBP2P32456 591 aaPredicted RBP13.78□□□□□ -0.2
BEST1-208ENST00000534553 GARSP41250 739 aaKnown RBP13.78□□□□□ -0.2
BEST1-208ENST00000534553 ALDH7A1P49419 539 aaKnown RBP13.78□□□□□ -0.2
BEST1-208ENST00000534553 HNRNPH2P55795 449 aaKnown RBP13.78□□□□□ -0.2
BEST1-208ENST00000534553 FAAP100Q0VG06 881 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 IFRD2Q12894 506 aaPredicted RBP13.78□□□□□ -0.2
BEST1-208ENST00000534553 HP1BP3Q5SSJ5 553 aaPredicted RBP13.78□□□□□ -0.2
BEST1-208ENST00000534553 LGSNQ5TDP6 509 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 NUGGCQ68CJ6 796 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 LRRC8BQ6P9F7 803 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 CTU1Q7Z7A3 348 aaKnown RBP13.78□□□□□ -0.2
BEST1-208ENST00000534553 CAND1Q86VP6 1230 aaKnown RBP13.78□□□□□ -0.2
BEST1-208ENST00000534553 SRRM1Q8IYB3 904 aaKnown RBP13.78□□□□□ -0.2
BEST1-208ENST00000534553 DYDC1Q8WWB3 177 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 TBC1D31Q96DN5 1066 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 CDK5RAP1Q96SZ6 601 aaKnown RBP13.78□□□□□ -0.2
BEST1-208ENST00000534553 PAFAH2Q99487 392 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 TLR8Q9NR97 1041 aaKnown RBP13.78□□□□□ -0.2
BEST1-208ENST00000534553 KLHL8Q9P2G9 620 aaPredicted RBP13.78□□□□□ -0.2
BEST1-208ENST00000534553 ZC3H7BQ9UGR2 993 aaKnown RBP13.78□□□□□ -0.2
BEST1-208ENST00000534553 MFHAS1Q9Y4C4 1052 aa13.78□□□□□ -0.2
BEST1-208ENST00000534553 A0A1W2PQH9 124 aa13.77□□□□□ -0.21
BEST1-208ENST00000534553 TCRBV9S1A1TA0A576 114 aa13.77□□□□□ -0.21
BEST1-208ENST00000534553 MTMR11A4FU01 709 aa13.77□□□□□ -0.21
BEST1-208ENST00000534553 FAM47DPA6NHR8 397 aa13.77□□□□□ -0.21
BEST1-208ENST00000534553 DNAJB2P25686 324 aa13.77□□□□□ -0.21
BEST1-208ENST00000534553 KPNA1P52294 538 aaPredicted RBP13.77□□□□□ -0.21
BEST1-208ENST00000534553 WASHC5Q12768 1159 aa13.77□□□□□ -0.21
BEST1-208ENST00000534553 FAXCQ5TGI0 409 aa13.77□□□□□ -0.21
BEST1-208ENST00000534553 MANEALQ5VSG8 457 aa13.77□□□□□ -0.21
BEST1-208ENST00000534553 CAPN12Q6ZSI9 719 aa13.77□□□□□ -0.21
BEST1-208ENST00000534553 MDM1Q8TC05 714 aa13.77□□□□□ -0.21
BEST1-208ENST00000534553 ZNF473Q8WTR7 871 aaKnown RBP13.77□□□□□ -0.21
BEST1-208ENST00000534553 CASP10Q92851 521 aa13.77□□□□□ -0.21
BEST1-208ENST00000534553 EBNA1BP2Q99848 306 aaKnown RBP13.77□□□□□ -0.21
BEST1-208ENST00000534553 KCNK9Q9NPC2 374 aa13.77□□□□□ -0.21
BEST1-208ENST00000534553 HSFX1Q9UBD0 423 aa13.77□□□□□ -0.21
BEST1-208ENST00000534553 ZNF180Q9UJW8 692 aa13.77□□□□□ -0.21
BEST1-208ENST00000534553 ATXN2Q99700 1313 aaKnown RBP13.77□□□□□ -0.21
BEST1-208ENST00000534553 BRCA2P51587 3418 aa13.77□□□□□ -0.21
BEST1-208ENST00000534553 KCNU1A8MYU2 1149 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 PSMD3O43242 534 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 BANF1O75531 89 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 APOEP02649 317 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 INHBAP08476 426 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 PRKCHP24723 683 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 DDR2Q16832 855 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 USP41Q3LFD5 358 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 ZNF449Q6P9G9 518 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 PID1Q7Z2X4 250 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 CYP4X1Q8N118 509 aa13.76□□□□□ -0.21
BEST1-208ENST00000534553 ZNF567Q8N184 647 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms