RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 VPS45Q9NRW7 570 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 ABCB8Q9NUT2 735 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 TMEM51Q9NW97 253 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 DDIT4Q9NX09 232 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 DLL3Q9NYJ7 618 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 RRN3Q9NYV6 651 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 IFNKQ9P0W0 207 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 CALCOCO1Q9P1Z2 691 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 RAD54BQ9Y620 910 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 DMXL1Q9Y485 3027 aa17.26■□□□□ 0.35
PKP3-209ENST00000533069 MYOFQ9NZM1 2061 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 MAP3K13O43283 966 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 SYNCRIPO60506 623 aaKnown RBP17.25■□□□□ 0.35
PKP3-209ENST00000533069 GRAP2O75791 330 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 ADCY5O95622 1261 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 ABCB4P21439 1286 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 BCKDHBP21953 392 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 NOS2P35228 1153 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 SOX5P35711 763 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 GABRB2P47870 512 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 KLK7P49862 253 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 JAM2P57087 298 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 UBXN1Q04323 297 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 NR1I3Q14994 352 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 SYCP1Q15431 976 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 RSPO4Q2I0M5 234 aaPredicted RBP17.25■□□□□ 0.35
PKP3-209ENST00000533069 PLA2G2CQ5R387 149 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 TAF3Q5VWG9 929 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 TMEM215Q68D42 235 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 SERPINA13PQ6UXR4 307 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 CHST9Q7L1S5 443 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 CHSY1Q86X52 802 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 ERICH1Q86X53 443 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 NEK11Q8NG66 645 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 FIBINQ8TAL6 211 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 NETO1Q8TDF5 533 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 RLN3Q8WXF3 142 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 C18orf8Q96DM3 657 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 PCMTD1Q96MG8 357 aaPredicted RBP17.25■□□□□ 0.35
PKP3-209ENST00000533069 ERGIC2Q96RQ1 377 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 XPO4Q9C0E2 1151 aaKnown RBP17.25■□□□□ 0.35
PKP3-209ENST00000533069 NUCKS1Q9H1E3 243 aaKnown RBP17.25■□□□□ 0.35
PKP3-209ENST00000533069 NOCTQ9UK39 431 aaKnown RBP17.25■□□□□ 0.35
PKP3-209ENST00000533069 CDV3Q9UKY7 258 aaKnown RBP17.25■□□□□ 0.35
PKP3-209ENST00000533069 STAP1Q9ULZ2 295 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 PLA2G4CQ9UP65 541 aa17.25■□□□□ 0.35
PKP3-209ENST00000533069 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.25■□□□□ 0.35
PKP3-209ENST00000533069 BCLAF3A2AJT9 711 aaKnown RBP17.24■□□□□ 0.35
PKP3-209ENST00000533069 KCNU1A8MYU2 1149 aa17.24■□□□□ 0.35
PKP3-209ENST00000533069 WASH3PC4AMC7 463 aa17.24■□□□□ 0.35
PKP3-209ENST00000533069 GFPT2O94808 682 aa17.24■□□□□ 0.35
PKP3-209ENST00000533069 ATP5BP06576 529 aaKnown RBP17.24■□□□□ 0.35
PKP3-209ENST00000533069 TACR2P21452 398 aa17.24■□□□□ 0.35
PKP3-209ENST00000533069 STAT1P42224 750 aa17.24■□□□□ 0.35
PKP3-209ENST00000533069 DPP6P42658 865 aa17.24■□□□□ 0.35
PKP3-209ENST00000533069 MATKP42679 507 aa17.24■□□□□ 0.35
PKP3-209ENST00000533069 PITX1P78337 314 aaPredicted RBP17.24■□□□□ 0.35
PKP3-209ENST00000533069 CDR2Q01850 454 aa17.24■□□□□ 0.35
PKP3-209ENST00000533069 CREB5Q02930 508 aa17.24■□□□□ 0.35
PKP3-209ENST00000533069 CDH18Q13634 790 aa17.24■□□□□ 0.35
PKP3-209ENST00000533069 FUT11Q495W5 492 aa17.24■□□□□ 0.35
PKP3-209ENST00000533069 TTC39BQ5VTQ0 682 aaPredicted RBP17.24■□□□□ 0.35
PKP3-209ENST00000533069 SLC36A4Q6YBV0 504 aa17.24■□□□□ 0.35
PKP3-209ENST00000533069 ERMP1Q7Z2K6 904 aa17.24■□□□□ 0.35
PKP3-209ENST00000533069 CYP2U1Q7Z449 544 aa17.24■□□□□ 0.35
PKP3-209ENST00000533069 METTL3Q86U44 580 aaKnown RBP17.24■□□□□ 0.35
PKP3-209ENST00000533069 ADIPOR2Q86V24 386 aa17.24■□□□□ 0.35
PKP3-209ENST00000533069 C12orf50Q8NA57 414 aaPredicted RBP17.24■□□□□ 0.35
PKP3-209ENST00000533069 RNF34Q969K3 372 aa17.24■□□□□ 0.35
PKP3-209ENST00000533069 MRGPRX1Q96LB2 322 aa17.24■□□□□ 0.35
PKP3-209ENST00000533069 NLRC4Q9NPP4 1024 aa17.24■□□□□ 0.35
PKP3-209ENST00000533069 STIM2Q9P246 746 aa17.24■□□□□ 0.35
PKP3-209ENST00000533069 XPO7Q9UIA9 1087 aaKnown RBP17.24■□□□□ 0.35
PKP3-209ENST00000533069 ITIH6Q6UXX5 1313 aa17.23■□□□□ 0.35
PKP3-209ENST00000533069 F5H5T6 163 aa17.23■□□□□ 0.35
PKP3-209ENST00000533069 EPHB6O15197 1021 aa17.23■□□□□ 0.35
PKP3-209ENST00000533069 AP5Z1O43299 807 aa17.23■□□□□ 0.35
PKP3-209ENST00000533069 LUC7L3O95232 432 aaKnown RBP17.23■□□□□ 0.35
PKP3-209ENST00000533069 MMEP08473 750 aa17.23■□□□□ 0.35
PKP3-209ENST00000533069 DLDP09622 509 aaKnown RBP17.23■□□□□ 0.35
PKP3-209ENST00000533069 POLR2EP19388 210 aaKnown RBP17.23■□□□□ 0.35
PKP3-209ENST00000533069 CD70P32970 193 aa17.23■□□□□ 0.35
PKP3-209ENST00000533069 DHPSP49366 369 aaPredicted RBP17.23■□□□□ 0.35
PKP3-209ENST00000533069 RPS24P62847 133 aaKnown RBP17.23■□□□□ 0.35
PKP3-209ENST00000533069 NOMO3P69849 1222 aa17.23■□□□□ 0.35
PKP3-209ENST00000533069 CCDC173Q0VFZ6 552 aa17.23■□□□□ 0.35
PKP3-209ENST00000533069 TRIM14Q14142 442 aa17.23■□□□□ 0.35
PKP3-209ENST00000533069 RAP1GAP2Q684P5 730 aa17.23■□□□□ 0.35
PKP3-209ENST00000533069 MBLAC2Q68D91 279 aa17.23■□□□□ 0.35
PKP3-209ENST00000533069 TRIM72Q6ZMU5 477 aa17.23■□□□□ 0.35
PKP3-209ENST00000533069 XYLT1Q86Y38 959 aa17.23■□□□□ 0.35
PKP3-209ENST00000533069 LGI2Q8N0V4 545 aa17.23■□□□□ 0.35
PKP3-209ENST00000533069 WFDC5Q8TCV5 224 aa17.23■□□□□ 0.35
PKP3-209ENST00000533069 SORCS1Q8WY21 1168 aa17.23■□□□□ 0.35
PKP3-209ENST00000533069 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.23■□□□□ 0.35
PKP3-209ENST00000533069 MBD1Q9UIS9 605 aaPredicted RBP17.23■□□□□ 0.35
PKP3-209ENST00000533069 PAXBP1Q9Y5B6 917 aa17.23■□□□□ 0.35
PKP3-209ENST00000533069 ATG2BQ96BY7 2078 aa17.22■□□□□ 0.35
PKP3-209ENST00000533069 SYNJ2BP-COX16A0A087WUM0 186 aa17.22■□□□□ 0.35
PKP3-209ENST00000533069 M0QYT0 321 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms