RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 SYT12Q8IV01 421 aa18.47■□□□□ 0.55
SMG1-203ENST00000532700 UNC45BQ8IWX7 931 aa18.47■□□□□ 0.55
SMG1-203ENST00000532700 GOLGA1Q92805 767 aa18.47■□□□□ 0.55
SMG1-203ENST00000532700 AZIN2Q96A70 460 aa18.47■□□□□ 0.55
SMG1-203ENST00000532700 PPP1R13BQ96KQ4 1090 aa18.47■□□□□ 0.55
SMG1-203ENST00000532700 SLC2A13Q96QE2 648 aa18.47■□□□□ 0.55
SMG1-203ENST00000532700 PRMT1Q99873 361 aaKnown RBP18.47■□□□□ 0.55
SMG1-203ENST00000532700 LSM14BQ9BX40 385 aaKnown RBP18.47■□□□□ 0.55
SMG1-203ENST00000532700 POPDC2Q9HBU9 364 aa18.47■□□□□ 0.55
SMG1-203ENST00000532700 ANLNQ9NQW6 1124 aa18.47■□□□□ 0.55
SMG1-203ENST00000532700 SYNJ2BP-COX16A0A087WUM0 186 aa18.46■□□□□ 0.55
SMG1-203ENST00000532700 I6L893 689 aaPredicted RBP18.46■□□□□ 0.55
SMG1-203ENST00000532700 SLC11A2P49281 568 aa18.46■□□□□ 0.55
SMG1-203ENST00000532700 TPMTP51580 245 aa18.46■□□□□ 0.55
SMG1-203ENST00000532700 CAMK2GQ13555 558 aaPredicted RBP18.46■□□□□ 0.55
SMG1-203ENST00000532700 FNDC3BQ53EP0 1204 aaKnown RBP18.46■□□□□ 0.55
SMG1-203ENST00000532700 TCP11X2Q5H9J9 407 aa18.46■□□□□ 0.55
SMG1-203ENST00000532700 KLHDC7AQ5VTJ3 777 aa18.46■□□□□ 0.55
SMG1-203ENST00000532700 CDKAL1Q5VV42 579 aa18.46■□□□□ 0.55
SMG1-203ENST00000532700 BEND5Q7L4P6 421 aa18.46■□□□□ 0.55
SMG1-203ENST00000532700 MFN1Q8IWA4 741 aa18.46■□□□□ 0.55
SMG1-203ENST00000532700 LGI2Q8N0V4 545 aa18.46■□□□□ 0.55
SMG1-203ENST00000532700 HJURPQ8NCD3 748 aaPredicted RBP18.46■□□□□ 0.55
SMG1-203ENST00000532700 UCMAQ8WVF2 138 aa18.46■□□□□ 0.55
SMG1-203ENST00000532700 DDX1Q92499 740 aaKnown RBP18.46■□□□□ 0.55
SMG1-203ENST00000532700 TOE1Q96GM8 510 aaKnown RBP18.46■□□□□ 0.55
SMG1-203ENST00000532700 MRGPRX3Q96LB0 322 aa18.46■□□□□ 0.55
SMG1-203ENST00000532700 GANQ9H2C0 597 aa18.46■□□□□ 0.55
SMG1-203ENST00000532700 ITM2CQ9NQX7 267 aa18.46■□□□□ 0.55
SMG1-203ENST00000532700 WSB2Q9NYS7 404 aaPredicted RBP18.46■□□□□ 0.55
SMG1-203ENST00000532700 COX16Q9P0S2 106 aa18.46■□□□□ 0.55
SMG1-203ENST00000532700 EVLQ9UI08 416 aaPredicted RBP18.46■□□□□ 0.55
SMG1-203ENST00000532700 NFE2L3Q9Y4A8 694 aa18.46■□□□□ 0.55
SMG1-203ENST00000532700 CAPN9O14815 690 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 SART1O43290 800 aaKnown RBP18.45■□□□□ 0.54
SMG1-203ENST00000532700 AP5Z1O43299 807 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 ENGP17813 658 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 TACR2P21452 398 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 MAPK8P45983 427 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 CENPCQ03188 943 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 BYSLQ13895 437 aaKnown RBP18.45■□□□□ 0.54
SMG1-203ENST00000532700 RAPGEF1Q13905 1077 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 STARD3Q14849 445 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 CCDC183Q5T5S1 534 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 N4BP2L1Q5TBK1 243 aaPredicted RBP18.45■□□□□ 0.54
SMG1-203ENST00000532700 TAF3Q5VWG9 929 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 TRNP1Q6NT89 227 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 NOP9Q86U38 636 aaKnown RBP18.45■□□□□ 0.54
SMG1-203ENST00000532700 FAM124AQ86V42 546 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 APCDD1Q8J025 514 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 AHI1Q8N157 1196 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 CARNMT1Q8N4J0 409 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 OR52K2Q8NGK3 314 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 WFIKKN2Q8TEU8 576 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 GPR174Q9BXC1 333 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 LHX5Q9H2C1 402 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 CAPN10Q9HC96 672 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 PRSS16Q9NQE7 514 aa18.45■□□□□ 0.54
SMG1-203ENST00000532700 ASCC3Q8N3C0 2202 aaKnown RBP18.45■□□□□ 0.54
SMG1-203ENST00000532700 PLXNA2O75051 1894 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 KCNU1A8MYU2 1149 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 ZNF217O75362 1048 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 KCNK5O95279 499 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 CFIP05156 583 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 CD6P30203 668 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 CSKP41240 450 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 ZNF445P59923 1031 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 PTK2Q05397 1052 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 KRT31Q15323 416 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 CT47A1Q5JQC4 288 aaPredicted RBP18.44■□□□□ 0.54
SMG1-203ENST00000532700 SPDYCQ5MJ68 293 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 MPP7Q5T2T1 576 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 OR6B2Q6IFH4 312 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 SLC23A3Q6PIS1 610 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 SLC36A4Q6YBV0 504 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 CHSY1Q86X52 802 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 FAM114A1Q8IWE2 563 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 FIBINQ8TAL6 211 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 SLC20A1Q8WUM9 679 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 SIPA1Q96FS4 1042 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 ZNF419Q96HQ0 510 aaPredicted RBP18.44■□□□□ 0.54
SMG1-203ENST00000532700 VPS16Q9H269 839 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 FAM204AQ9H8W3 233 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 TMEM9BQ9NQ34 198 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 TMPRSS4Q9NRS4 437 aa18.44■□□□□ 0.54
SMG1-203ENST00000532700 TP53BP1Q12888 1972 aaPredicted RBP18.43■□□□□ 0.54
SMG1-203ENST00000532700 PES1O00541 588 aaKnown RBP18.43■□□□□ 0.54
SMG1-203ENST00000532700 NPC1O15118 1278 aa18.43■□□□□ 0.54
SMG1-203ENST00000532700 SYNCRIPO60506 623 aaKnown RBP18.43■□□□□ 0.54
SMG1-203ENST00000532700 LUC7L3O95232 432 aaKnown RBP18.43■□□□□ 0.54
SMG1-203ENST00000532700 DLDP09622 509 aaKnown RBP18.43■□□□□ 0.54
SMG1-203ENST00000532700 UCHL3P15374 230 aa18.43■□□□□ 0.54
SMG1-203ENST00000532700 CYP11B1P15538 503 aa18.43■□□□□ 0.54
SMG1-203ENST00000532700 UAP1L1Q3KQV9 507 aa18.43■□□□□ 0.54
SMG1-203ENST00000532700 PITRM1Q5JRX3 1037 aa18.43■□□□□ 0.54
SMG1-203ENST00000532700 ARTNQ5T4W7 220 aa18.43■□□□□ 0.54
SMG1-203ENST00000532700 PSAPL1Q6NUJ1 521 aa18.43■□□□□ 0.54
SMG1-203ENST00000532700 SASS6Q6UVJ0 657 aa18.43■□□□□ 0.54
SMG1-203ENST00000532700 C14orf80Q86SX3 495 aa18.43■□□□□ 0.54
SMG1-203ENST00000532700 METTL3Q86U44 580 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms