RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 PPP1R13BQ96KQ4 1090 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 NAA15Q9BXJ9 866 aaKnown RBP10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 IRX2Q9BZI1 471 aaPredicted RBP10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 LHX5Q9H2C1 402 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 POPDC2Q9HBU9 364 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 WSB2Q9NYS7 404 aaPredicted RBP10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 FHOD1Q9Y613 1164 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 KNL1Q8NG31 2342 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 FAM170AA1A519 330 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 KCNU1A8MYU2 1149 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 CAPN9O14815 690 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 GIPC1O14908 333 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 ZBTB24O43167 697 aaPredicted RBP10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 SYNCRIPO60506 623 aaKnown RBP10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 C7P10643 843 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 TACR2P21452 398 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 MAOBP27338 520 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 CD6P30203 668 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 ANP32AP39687 249 aaKnown RBP10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 TPMTP51580 245 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 PTK2Q05397 1052 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 CAMK2GQ13555 558 aaPredicted RBP10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 DRAP1Q14919 205 aaPredicted RBP10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 PTPN20Q4JDL3 420 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 FNDC3BQ53EP0 1204 aaKnown RBP10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 TCP11X2Q5H9J9 407 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 OTUD1Q5VV17 481 aaPredicted RBP10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 RAP1GAP2Q684P5 730 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 SLC23A3Q6PIS1 610 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 OLFML1Q6UWY5 402 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 SERPINA13PQ6UXR4 307 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 RBM43Q6ZSC3 357 aaKnown RBP10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 FAM183BPQ6ZVS7 135 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 CACUL1Q86Y37 369 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 LGI2Q8N0V4 545 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 AHI1Q8N157 1196 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 CARNMT1Q8N4J0 409 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 HJURPQ8NCD3 748 aaPredicted RBP10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 TOE1Q96GM8 510 aaKnown RBP10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 MRGPRX3Q96LB0 322 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 HSPA12BQ96MM6 686 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 PRMT1Q99873 361 aaKnown RBP10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 ADAM33Q9BZ11 813 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 CAPN10Q9HC96 672 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 TMEM9BQ9NQ34 198 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 PRSS16Q9NQE7 514 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 ASNSD1Q9NWL6 643 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 TAB2Q9NYJ8 693 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 NFE2L3Q9Y4A8 694 aa10.82□□□□□ -0.68
PRPF40B-204ENST00000527253 EPG5Q9HCE0 2579 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 KCNK5O95279 499 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 IGLV3-19P01714 112 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 DLDP09622 509 aaKnown RBP10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 CYP11B1P15538 503 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 ENGP17813 658 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 POLR2EP19388 210 aaKnown RBP10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 TFE3P19532 575 aaPredicted RBP10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 CSKP41240 450 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 CTSOP43234 321 aaPredicted RBP10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 MAPK8P45983 427 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 KLK7P49862 253 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 IRAK1P51617 712 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 RAPGEF1Q13905 1077 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 DUOXA1Q1HG43 343 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 CT47A1Q5JQC4 288 aaPredicted RBP10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 CDKAL1Q5VV42 579 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 SMYD5Q6GMV2 418 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 OR6B2Q6IFH4 312 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 C11orf57Q6ZUT1 292 aaPredicted RBP10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 MFN1Q8IWA4 741 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 OR2I1PQ8NGU4 316 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 OR2T3Q8NH03 318 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 ENOX1Q8TC92 643 aaKnown RBP10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 DDX1Q92499 740 aaKnown RBP10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 PRCCQ92733 491 aaPredicted RBP10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 SIPA1Q96FS4 1042 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 ANLNQ9NQW6 1124 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 DACH1Q9UI36 760 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 SLC6A14Q9UN76 642 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 PLA2G4CQ9UP65 541 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 LAMA1P25391 3075 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 ADAMTS9Q9P2N4 1935 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 PCDH15Q96QU1 1955 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 PCNX2A6NKB5 2137 aa10.81□□□□□ -0.68
PRPF40B-204ENST00000527253 SYNJ2BP-COX16A0A087WUM0 186 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 I6L893 689 aaPredicted RBP10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 EPHB6O15197 1021 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 HSF2BPO75031 334 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 NDUFS2O75306 463 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 LUC7L3O95232 432 aaKnown RBP10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 APOEP02649 317 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 CFIP05156 583 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 GLI1P08151 1106 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 SERPINF2P08697 491 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 UCHL3P15374 230 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 EEF1GP26641 437 aaKnown RBP10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 CDH5P33151 784 aaPredicted RBP10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 HOXD12P35452 270 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 KRT9P35527 623 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 NUMBP49757 651 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms