RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 CFAP52Q8N1V2 620 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 SLC35F6Q8N357 371 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 IGSF8Q969P0 613 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 AZIN2Q96A70 460 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 CALR3Q96L12 384 aaKnown RBP14.18□□□□□ -0.14
CD44-224ENST00000526669 HAPLN3Q96S86 360 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 PRMT1Q99873 361 aaKnown RBP14.18□□□□□ -0.14
CD44-224ENST00000526669 DDX50Q9BQ39 737 aaKnown RBP14.18□□□□□ -0.14
CD44-224ENST00000526669 FAM83CQ9BQN1 747 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 GTSE1Q9NYZ3 720 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 GOLGA6L9A6NEM1 432 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 E9PAM4 449 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 NEDD8-MDP1E9PL57 170 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 NFATC1O95644 943 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 CD48P09326 243 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 L1CAMP32004 1257 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 CDH6P55285 790 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 RPS24P62847 133 aaKnown RBP14.17□□□□□ -0.14
CD44-224ENST00000526669 MMRN1Q13201 1228 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 PDGFRLQ15198 375 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 DHCR24Q15392 516 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 BOLA3Q53S33 107 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 FBXL22Q6P050 247 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 RHBDF2Q6PJF5 856 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 RHOT1Q8IXI2 618 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 FAM217AQ8IXS0 508 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 CPXM2Q8N436 756 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 DDI1Q8WTU0 396 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 TEKT4Q8WW24 435 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 IRF7Q92985 503 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 CD101Q93033 1021 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 ATP2A3Q93084 1043 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 NXPE3Q969Y0 559 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 OTUB2Q96DC9 234 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 RPRD1AQ96P16 312 aaPredicted RBP14.17□□□□□ -0.14
CD44-224ENST00000526669 OSBPL2Q9H1P3 480 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 ECT2Q9H8V3 914 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 CD320Q9NPF0 282 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 SPHK2Q9NRA0 654 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 MPP6Q9NZW5 540 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 OR12D3Q9UGF7 316 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 STOML2Q9UJZ1 356 aa14.17□□□□□ -0.14
CD44-224ENST00000526669 LRRD1A4D1F6 860 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 OTOL1A6NHN0 477 aaPredicted RBP14.16□□□□□ -0.14
CD44-224ENST00000526669 EEF2KO00418 725 aaKnown RBP14.16□□□□□ -0.14
CD44-224ENST00000526669 PSTPIP1O43586 416 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 KIF5CO60282 957 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 CNTN5O94779 1100 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 LRIG2O94898 1065 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 KRT7P08729 469 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 ADH5P11766 374 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 GOT1P17174 413 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 CTNNA2P26232 953 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 CHKAP35790 457 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 SOX9P48436 509 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 AIF1P55008 147 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 MLLT6P55198 1093 aaPredicted RBP14.16□□□□□ -0.14
CD44-224ENST00000526669 TPI1P60174 286 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 TDGQ13569 410 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 RUNX3Q13761 415 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 LLGL1Q15334 1064 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 TJAP1Q5JTD0 557 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 ARTNQ5T4W7 220 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 IER5LQ5T953 404 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 RWDD4Q6NW29 188 aaKnown RBP14.16□□□□□ -0.14
CD44-224ENST00000526669 RNF135Q8IUD6 432 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 ZNF683Q8IZ20 524 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 ADGRG2Q8IZP9 1017 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 CPA6Q8N4T0 437 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 NAT16Q8N8M0 369 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 HJURPQ8NCD3 748 aaPredicted RBP14.16□□□□□ -0.14
CD44-224ENST00000526669 TRIM58Q8NG06 486 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 CSGALNACT1Q8TDX6 532 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 RAPGEF5Q92565 580 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 RNF25Q96BH1 459 aaPredicted RBP14.16□□□□□ -0.14
CD44-224ENST00000526669 TBC1D31Q96DN5 1066 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 EPAS1Q99814 870 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 BBS2Q9BXC9 721 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 PCDH18Q9HCL0 1135 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 TMEM51Q9NW97 253 aa14.16□□□□□ -0.14
CD44-224ENST00000526669 TRIOO75962 3097 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 ARNTLO00327 626 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 GFRA2O00451 464 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 ENC1O14682 589 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 DDX3YO15523 660 aaKnown RBP14.15□□□□□ -0.14
CD44-224ENST00000526669 CYBBP04839 570 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 KDELR1P24390 212 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 CTNNA1P35221 906 aaKnown RBP14.15□□□□□ -0.14
CD44-224ENST00000526669 NUMBP49757 651 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 SEMA3BQ13214 749 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 DPYSL3Q14195 570 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 DPYSL2Q16555 572 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 MPPE1Q53F39 396 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 ALFQ53S48 1182 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 ODF2Q5BJF6 829 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 RABGAP1LQ5R372 815 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 MEI1Q5TIA1 1274 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 MANEALQ5VSG8 457 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 FYB2Q5VWT5 728 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 NAIF1Q69YI7 327 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms