RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 MRGPRX1Q96LB2 322 aa19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 PRICKLE1Q96MT3 831 aaPredicted RBP19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 BPIFA3Q9BQP9 254 aa19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 NUCKS1Q9H1E3 243 aaKnown RBP19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 FBRSQ9HAH7 460 aa19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 DDIT4Q9NX09 232 aa19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 RAD54BQ9Y620 910 aa19.11■□□□□ 0.65
TSPAN4-216ENST00000526055 MOCS2O96007 188 aaPredicted RBP19.1■□□□□ 0.65
TSPAN4-216ENST00000526055 DLDP09622 509 aaKnown RBP19.1■□□□□ 0.65
TSPAN4-216ENST00000526055 C7P10643 843 aa19.1■□□□□ 0.65
TSPAN4-216ENST00000526055 SOX5P35711 763 aa19.1■□□□□ 0.65
TSPAN4-216ENST00000526055 MATKP42679 507 aa19.1■□□□□ 0.65
TSPAN4-216ENST00000526055 JAM2P57087 298 aa19.1■□□□□ 0.65
TSPAN4-216ENST00000526055 FUT11Q495W5 492 aa19.1■□□□□ 0.65
TSPAN4-216ENST00000526055 AASDHQ4L235 1098 aaPredicted RBP19.1■□□□□ 0.65
TSPAN4-216ENST00000526055 TTC39BQ5VTQ0 682 aaPredicted RBP19.1■□□□□ 0.65
TSPAN4-216ENST00000526055 SERPINA13PQ6UXR4 307 aa19.1■□□□□ 0.65
TSPAN4-216ENST00000526055 DGLUCYQ7Z3D6 616 aa19.1■□□□□ 0.65
TSPAN4-216ENST00000526055 CYP2U1Q7Z449 544 aa19.1■□□□□ 0.65
TSPAN4-216ENST00000526055 NOP9Q86U38 636 aaKnown RBP19.1■□□□□ 0.65
TSPAN4-216ENST00000526055 ERICH1Q86X53 443 aa19.1■□□□□ 0.65
TSPAN4-216ENST00000526055 LMLNQ96KR4 655 aa19.1■□□□□ 0.65
TSPAN4-216ENST00000526055 SPAG5Q96R06 1193 aa19.1■□□□□ 0.65
TSPAN4-216ENST00000526055 ERGIC2Q96RQ1 377 aa19.1■□□□□ 0.65
TSPAN4-216ENST00000526055 FAM207AQ9NSI2 230 aaPredicted RBP19.1■□□□□ 0.65
TSPAN4-216ENST00000526055 MBD1Q9UIS9 605 aaPredicted RBP19.1■□□□□ 0.65
TSPAN4-216ENST00000526055 STAP1Q9ULZ2 295 aa19.1■□□□□ 0.65
TSPAN4-216ENST00000526055 F5H5T6 163 aa19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 SLC30A4O14863 429 aa19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 ASLP04424 464 aa19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 POLR2EP19388 210 aaKnown RBP19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 TACR2P21452 398 aa19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 HOXD12P35452 270 aa19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 STAT1P42224 750 aa19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 RPS24P62847 133 aaKnown RBP19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 PITX1P78337 314 aaPredicted RBP19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 CDH18Q13634 790 aa19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 SYCP1Q15431 976 aa19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 ACBD5Q5T8D3 534 aaPredicted RBP19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 MBLAC2Q68D91 279 aa19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 ARCQ7LC44 396 aa19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 CHSY1Q86X52 802 aa19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 NEK11Q8NG66 645 aa19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 RNF34Q969K3 372 aa19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 TTC17Q96AE7 1141 aa19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 PGAP3Q96FM1 320 aaPredicted RBP19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 TMEM245Q9H330 911 aa19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 PRDM16Q9HAZ2 1276 aa19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 STIM2Q9P246 746 aa19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 NOCTQ9UK39 431 aaKnown RBP19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 PAXBP1Q9Y5B6 917 aa19.09■□□□□ 0.65
TSPAN4-216ENST00000526055 THADAQ6YHU6 1953 aa19.08■□□□□ 0.65
TSPAN4-216ENST00000526055 IGHV1OR15-9A0A0B4J2B8 117 aa19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 SMTNL1A8MU46 457 aa19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 GRAP2O75791 330 aa19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 LUC7L3O95232 432 aaKnown RBP19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 F9P00740 461 aa19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 EPHX1P07099 455 aa19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 DHPSP49366 369 aaPredicted RBP19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 KLK7P49862 253 aa19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 ATXN1P54253 815 aaKnown RBP19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 OXCT1P55809 520 aa19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 NOMO3P69849 1222 aa19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 CDR2Q01850 454 aa19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 UBXN1Q04323 297 aa19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 CAMK2GQ13555 558 aaPredicted RBP19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 SLC12A1Q13621 1099 aa19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 FNDC3BQ53EP0 1204 aaKnown RBP19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 RABGAP1LQ5R372 815 aa19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 TAF3Q5VWG9 929 aa19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 TRIM72Q6ZMU5 477 aa19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 LGI2Q8N0V4 545 aa19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 KDM1BQ8NB78 822 aa19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 WFDC5Q8TCV5 224 aa19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 SORCS1Q8WY21 1168 aa19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 NT5C3BQ969T7 300 aa19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 PRMT1Q99873 361 aaKnown RBP19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 HSD3B7Q9H2F3 369 aa19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.08■□□□□ 0.643e-6■■■□□ 18.3
TSPAN4-216ENST00000526055 KIAA1522Q9P206 1035 aaPredicted RBP19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 USP36Q9P275 1121 aaKnown RBP19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 XPO7Q9UIA9 1087 aaKnown RBP19.08■□□□□ 0.64
TSPAN4-216ENST00000526055 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.07■□□□□ 0.64
TSPAN4-216ENST00000526055 GFPT2O94808 682 aa19.07■□□□□ 0.64
TSPAN4-216ENST00000526055 MOCS3O95396 460 aa19.07■□□□□ 0.64
TSPAN4-216ENST00000526055 CYP1A1P04798 512 aaPredicted RBP19.07■□□□□ 0.64
TSPAN4-216ENST00000526055 MMEP08473 750 aa19.07■□□□□ 0.64
TSPAN4-216ENST00000526055 PRKCHP24723 683 aa19.07■□□□□ 0.64
TSPAN4-216ENST00000526055 CD70P32970 193 aa19.07■□□□□ 0.64
TSPAN4-216ENST00000526055 RPL6Q02878 288 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-216ENST00000526055 LMAN2Q12907 356 aa19.07■□□□□ 0.64
TSPAN4-216ENST00000526055 SF3A2Q15428 464 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-216ENST00000526055 BRMS1LQ5PSV4 323 aa19.07■□□□□ 0.64
TSPAN4-216ENST00000526055 LYSMD4Q5XG99 296 aa19.07■□□□□ 0.64
TSPAN4-216ENST00000526055 RAP1GAP2Q684P5 730 aa19.07■□□□□ 0.64
TSPAN4-216ENST00000526055 KIAA1324Q6UXG2 1013 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-216ENST00000526055 APTXQ7Z2E3 356 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-216ENST00000526055 RABEPKQ7Z6M1 372 aa19.07■□□□□ 0.64
TSPAN4-216ENST00000526055 XYLT1Q86Y38 959 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms