RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 CD101Q93033 1021 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 TRIM11Q96F44 468 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 VCPIP1Q96JH7 1222 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 BTN2A3PQ96KV6 586 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 ACOX2Q99424 681 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 PRMT1Q99873 361 aaKnown RBP4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 P2RY13Q9BPV8 354 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 CNPY3Q9BT09 278 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 SNRNP25Q9BV90 132 aaKnown RBP4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 TRIM62Q9BVG3 475 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 DCLK3Q9C098 648 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 CIPCQ9C0C6 399 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 LACRTQ9GZZ8 138 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 MTG2Q9H4K7 406 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 DHX35Q9H5Z1 703 aaKnown RBP4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 LTB4R2Q9NPC1 389 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 ARHGEF4Q9NR80 690 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 ABCB8Q9NUT2 735 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 NDFIP2Q9NV92 336 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 ARHGEF38Q9NXL2 777 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 IMPACTQ9P2X3 320 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 DEC1Q9P2X7 70 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 ZMYM5Q9UJ78 669 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 FZD10Q9ULW2 581 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 SIT1Q9Y3P8 196 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 MFHAS1Q9Y4C4 1052 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 ACTL7AQ9Y615 435 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 EPN1Q9Y6I3 576 aaPredicted RBP4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 SCINQ9Y6U3 715 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 GREB1Q4ZG55 1949 aa4.76□□□□□ -1.65
CHMP4A-202ENST00000524955 OBSL1O75147 1896 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 TBC1D3BA6NDS4 549 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 GOLGA6L6A8MZA4 724 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 EIF3CLB5ME19 914 aaKnown RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 H0Y626 953 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 K7EQS6 105 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 GFRA2O00451 464 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 HOXC11O43248 304 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 PRPSAP2O60256 369 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 BUB1BO60566 1050 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 RNF40O75150 1001 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 RNF8O76064 485 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 KAT7O95251 611 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 MAP3K6O95382 1288 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 MOCS3O95396 460 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 F9P00740 461 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 PENKP01210 267 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 APODP05090 189 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 CD48P09326 243 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 CISD3P0C7P0 127 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 MYBL1P10243 752 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 RARAP10276 462 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 CHRNB1P11230 501 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 GOT1P17174 413 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 FECHP22830 423 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 GLDCP23378 1020 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 MZF1P28698 734 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 HLA-FP30511 346 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 CHKAP35790 457 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 CSKP41240 450 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 DNA2P51530 1060 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 MLLT6P55198 1093 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 CCZ1BP86790 482 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 CCZ1P86791 482 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 PRKCQQ04759 706 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 LMAN2Q12907 356 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 MMRN1Q13201 1228 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 FZD5Q13467 585 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 CDH18Q13634 790 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 PPP2R5DQ14738 602 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 FUT11Q495W5 492 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 PPP6R3Q5H9R7 873 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 TMEM196Q5HYL7 178 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 TMEM31Q5JXX7 168 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 DGKKQ5KSL6 1271 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 BRMS1LQ5PSV4 323 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 ZFYVE27Q5T4F4 411 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 ARTNQ5T4W7 220 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 RNF219Q5W0B1 726 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 EGFLAMQ63HQ2 1017 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 TMEM215Q68D42 235 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 HEATR6Q6AI08 1181 aaKnown RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 LINGO4Q6UY18 593 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 B4GALNT4Q76KP1 1039 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 CHST9Q7L1S5 443 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 STRADAQ7RTN6 431 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 KIAA1328Q86T90 577 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 RALGPS2Q86X27 583 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 CACUL1Q86Y37 369 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 MFN1Q8IWA4 741 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 TP53INP2Q8IXH6 220 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 ETFBKMTQ8IXQ9 262 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 CCDC170Q8IYT3 715 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 ZNF683Q8IZ20 524 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 CCAR2Q8N163 923 aaKnown RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 ZNF687Q8N1G0 1237 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 C17orf53Q8N3J3 647 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 PHTF2Q8N3S3 785 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 CPXM2Q8N436 756 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 ALLCQ8N6M5 410 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms