RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 FLOT2Q14254 428 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 E4F1Q66K89 784 aaPredicted RBP17.47■□□□□ 0.39
BEST1-203ENST00000524877 APLFQ8IW19 511 aaPredicted RBP17.47■□□□□ 0.39
BEST1-203ENST00000524877 C12orf56Q8IXR9 622 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 AVENQ9NQS1 362 aaPredicted RBP17.47■□□□□ 0.39
BEST1-203ENST00000524877 PSMC3IPQ9P2W1 217 aaPredicted RBP17.47■□□□□ 0.39
BEST1-203ENST00000524877 TARSL2A2RTX5 802 aaKnown RBP17.47■□□□□ 0.39
BEST1-203ENST00000524877 NEDD8-MDP1E9PL57 170 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 KRT8P05787 483 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 KITP10721 976 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 MYL2P10916 166 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 AAK1Q2M2I8 961 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 B4GALNT2Q8NHY0 566 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 OR8D1Q8WZ84 308 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 ZFP42Q96MM3 310 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 KIAA1522Q9P206 1035 aaPredicted RBP17.47■□□□□ 0.39
BEST1-203ENST00000524877 BTAF1O14981 1849 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 CLDN5O00501 218 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 COL6A1P12109 1028 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 FAXCQ5TGI0 409 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 KRT80Q6KB66 452 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 SH3RF1Q7Z6J0 888 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 TRIB2Q92519 343 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 CCDC3Q9BQI4 270 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 POLR1EQ9GZS1 481 aaKnown RBP17.47■□□□□ 0.39
BEST1-203ENST00000524877 DIABLOQ9NR28 239 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 STOML1Q9UBI4 398 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 STRCQ7RTU9 1775 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 COL2A1P02458 1487 aaPredicted RBP17.47■□□□□ 0.39
BEST1-203ENST00000524877 PDZK1P1A8MUH7 402 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 CFLARO15519 480 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 TADA3O75528 432 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 DMPKQ09013 629 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 KLHL23Q8NBE8 558 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 COLGALT1Q8NBJ5 622 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 GRIN3AQ8TCU5 1115 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 TGS1Q96RS0 853 aaKnown RBP17.47■□□□□ 0.39
BEST1-203ENST00000524877 NLNQ9BYT8 704 aa17.47■□□□□ 0.39
BEST1-203ENST00000524877 COPS7BQ9H9Q2 264 aaPredicted RBP17.47■□□□□ 0.39
BEST1-203ENST00000524877 SNED1Q8TER0 1413 aa17.46■□□□□ 0.39
BEST1-203ENST00000524877 NLRP9Q7RTR0 991 aa17.46■□□□□ 0.39
BEST1-203ENST00000524877 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.46■□□□□ 0.39
BEST1-203ENST00000524877 BSNDQ8WZ55 320 aa17.46■□□□□ 0.39
BEST1-203ENST00000524877 TNFRSF25Q93038 417 aa17.46■□□□□ 0.39
BEST1-203ENST00000524877 SLC9A7Q96T83 725 aa17.46■□□□□ 0.39
BEST1-203ENST00000524877 NMRK1Q9NWW6 199 aa17.46■□□□□ 0.39
BEST1-203ENST00000524877 DYRK3O43781 588 aa17.46■□□□□ 0.39
BEST1-203ENST00000524877 RPN2P04844 631 aa17.46■□□□□ 0.39
BEST1-203ENST00000524877 TIGD5Q53EQ6 642 aa17.46■□□□□ 0.39
BEST1-203ENST00000524877 MPPE1Q53F39 396 aa17.46■□□□□ 0.39
BEST1-203ENST00000524877 PITPNM3Q9BZ71 974 aa17.46■□□□□ 0.39
BEST1-203ENST00000524877 NUP188Q5SRE5 1749 aa17.46■□□□□ 0.39
BEST1-203ENST00000524877 AMPD1P23109 780 aa17.46■□□□□ 0.39
BEST1-203ENST00000524877 PEX6Q13608 980 aa17.46■□□□□ 0.39
BEST1-203ENST00000524877 ARHGAP22Q7Z5H3 698 aa17.46■□□□□ 0.39
BEST1-203ENST00000524877 OR12D3Q9UGF7 316 aa17.46■□□□□ 0.39
BEST1-203ENST00000524877 FBXL5Q9UKA1 691 aa17.46■□□□□ 0.39
BEST1-203ENST00000524877 PKD1L3Q7Z443 1732 aa17.46■□□□□ 0.39
BEST1-203ENST00000524877 ILF2Q12905 390 aaKnown RBP17.46■□□□□ 0.39
BEST1-203ENST00000524877 DOK6Q6PKX4 331 aa17.46■□□□□ 0.39
BEST1-203ENST00000524877 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.46■□□□□ 0.39
BEST1-203ENST00000524877 NR2E1Q9Y466 385 aa17.46■□□□□ 0.39
BEST1-203ENST00000524877 RGPD1P0DJD0 1748 aa17.46■□□□□ 0.38
BEST1-203ENST00000524877 GRM6O15303 877 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 TRIM16O95361 564 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 ZNF438Q7Z4V0 828 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 ARHGAP39Q9C0H5 1083 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 DUS2Q9NX74 493 aaKnown RBP17.45■□□□□ 0.38
BEST1-203ENST00000524877 SELENONQ9NZV5 590 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 MAGEA4P43358 317 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 MRPS5P82675 430 aaKnown RBP17.45■□□□□ 0.38
BEST1-203ENST00000524877 EFL1Q7Z2Z2 1120 aaKnown RBP17.45■□□□□ 0.38
BEST1-203ENST00000524877 TRMT11Q7Z4G4 463 aaKnown RBP17.45■□□□□ 0.38
BEST1-203ENST00000524877 IRS2Q9Y4H2 1338 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 NID2Q14112 1375 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 ERBB2P04626 1255 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 MORF4L2Q15014 288 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 FAM83EQ2M2I3 478 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 C3orf62Q6ZUJ4 267 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 MCRS1Q96EZ8 462 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 TBC1D23Q9NUY8 699 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 ARHGAP28Q9P2N2 729 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 RPS6KL1Q9Y6S9 549 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 A0A0G2JND7 137 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 ZNF862O60290 1169 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 FBXW10Q5XX13 1052 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 GLT6D1Q7Z4J2 308 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.45■□□□□ 0.38
BEST1-203ENST00000524877 MYCBPAPQ8TBZ2 947 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 SH3GL1Q99961 368 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 ACBD6Q9BR61 282 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 PACSIN1Q9BY11 444 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 DEC1Q9P2X7 70 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 EIF4E1BA6NMX2 242 aaKnown RBP17.45■□□□□ 0.38
BEST1-203ENST00000524877 USP27XA6NNY8 438 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 OR4Q2P0C623 313 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 TGM3Q08188 693 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 ZACNQ401N2 412 aa17.45■□□□□ 0.38
BEST1-203ENST00000524877 VARS2Q5ST30 1063 aaKnown RBP17.45■□□□□ 0.38
BEST1-203ENST00000524877 FAM161BQ96MY7 647 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms