RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 PYROXD2Q8N2H3 581 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 NAT8LQ8N9F0 302 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 ZNF461Q8TAF7 563 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 NSMCE1Q8WV22 266 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 CPT1BQ92523 772 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 HDAC11Q96DB2 347 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 BTN2A3PQ96KV6 586 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 OLFM3Q96PB7 478 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 SIK2Q9H0K1 926 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 ADAM7Q9H2U9 754 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 VPS37BQ9H9H4 285 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 USP29Q9HBJ7 922 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 ETNK2Q9NVF9 386 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 NINJ2Q9NZG7 142 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 TRPM5Q9NZQ8 1165 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 MARCH2Q9P0N8 246 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 DNMT3LQ9UJW3 386 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 ADAM21Q9UKJ8 722 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 SLC27A5Q9Y2P5 690 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 NFS1Q9Y697 457 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 PRRG1O14668 218 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 MFSD11O43934 449 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 CDH16O75309 829 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 PAGE1O75459 146 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 LRIG2O94898 1065 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 MLNP12872 115 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 NR1D1P20393 614 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 DNAJB2P25686 324 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 GBP2P32456 591 aaPredicted RBP10.27□□□□□ -0.77
VPS13B-212ENST00000524330 STX2P32856 288 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 CHKAP35790 457 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 ATP5C1P36542 298 aaKnown RBP10.27□□□□□ -0.77
VPS13B-212ENST00000524330 GDF10P55107 478 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 EFEMP1Q12805 493 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 CBLBQ13191 982 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 RAB33AQ14088 237 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 PRKD1Q15139 912 aaPredicted RBP10.27□□□□□ -0.77
VPS13B-212ENST00000524330 KYNUQ16719 465 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 BBS9Q3SYG4 887 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 PABPC1LQ4VXU2 614 aaKnown RBP10.27□□□□□ -0.77
VPS13B-212ENST00000524330 CCDC38Q502W7 563 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 ANKRD20A2Q5SQ80 823 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 ANKRD20A1Q5TYW2 823 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 ANKRD20A3Q5VUR7 823 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 FAM117BQ6P1L5 589 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 KLHDC10Q6PID8 442 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 KDM7AQ6ZMT4 941 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 LEKR1Q6ZMV7 388 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 CCDC13Q8IYE1 715 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 ELMOD1Q8N336 334 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 ATPAF2Q8N5M1 289 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 DNAJC5GQ8N7S2 189 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 PHOSPHO2Q8TCD6 241 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 CASP10Q92851 521 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 FCRL2Q96LA5 508 aaPredicted RBP10.27□□□□□ -0.77
VPS13B-212ENST00000524330 ZNF512Q96ME7 567 aaPredicted RBP10.27□□□□□ -0.77
VPS13B-212ENST00000524330 NAT9Q9BTE0 207 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 CYP4F11Q9HBI6 524 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 EIF2B3Q9NR50 452 aaKnown RBP10.27□□□□□ -0.77
VPS13B-212ENST00000524330 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.27□□□□□ -0.77
VPS13B-212ENST00000524330 SEPT10Q9P0V9 454 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 KLHL8Q9P2G9 620 aaPredicted RBP10.27□□□□□ -0.77
VPS13B-212ENST00000524330 PPARGC1AQ9UBK2 798 aaKnown RBP10.27□□□□□ -0.77
VPS13B-212ENST00000524330 FETUBQ9UGM5 382 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 SFMBT1Q9UHJ3 866 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 SLC24A2Q9UI40 661 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 MAGED2Q9UNF1 606 aaPredicted RBP10.27□□□□□ -0.77
VPS13B-212ENST00000524330 ASB3Q9Y575 518 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 INSL6Q9Y581 213 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 IKBKGQ9Y6K9 419 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 MYO16Q9Y6X6 1858 aa10.27□□□□□ -0.77
VPS13B-212ENST00000524330 LTBP2Q14767 1821 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 PLXNA3P51805 1871 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 EXOC1LA0A1B0GW35 172 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 SLC12A8A0AV02 714 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 WDR27A2RRH5 827 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 TRIM43BA6NCK2 446 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 ARHGAP42A6NI28 874 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 WASH4PA8MWX3 477 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 KCNU1A8MYU2 1149 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 E7ESA3 106 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 RNF103O00237 685 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 C2CD2LO14523 706 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 ABLIM3O94929 683 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 EFEMP2O95967 443 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 MOCS2O96007 188 aaPredicted RBP10.26□□□□□ -0.77
VPS13B-212ENST00000524330 CPP00450 1065 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 APRTP07741 180 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 HSPA1AP0DMV8 641 aaKnown RBP10.26□□□□□ -0.77
VPS13B-212ENST00000524330 HSPA1BP0DMV9 641 aaKnown RBP10.26□□□□□ -0.77
VPS13B-212ENST00000524330 RHOQP17081 205 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 CCNCP24863 283 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 HOXC13P31276 330 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 SLC11A2P49281 568 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 HARS2P49590 506 aaKnown RBP10.26□□□□□ -0.77
VPS13B-212ENST00000524330 GPR15P49685 360 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 TUBP50607 506 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 MLLT6P55198 1093 aaPredicted RBP10.26□□□□□ -0.77
VPS13B-212ENST00000524330 SKOR1P84550 965 aa10.26□□□□□ -0.77
VPS13B-212ENST00000524330 PPIDQ08752 370 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms